Source code for tvb.adapters.forms.model_forms

# -*- coding: utf-8 -*-
#
#
# TheVirtualBrain-Framework Package. This package holds all Data Management, and
# Web-UI helpful to run brain-simulations. To use it, you also need to download
# TheVirtualBrain-Scientific Package (for simulators). See content of the
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from tvb.simulator import models
from tvb.adapters.forms.form_with_ranges import FormWithRanges
from tvb.basic.neotraits.api import TupleEnum
from tvb.core.neotraits.forms import Form, ArrayField, MultiSelectField


[docs]class ModelsEnum(TupleEnum): GENERIC_2D_OSCILLATOR = (models.ModelsEnum.GENERIC_2D_OSCILLATOR.get_class(), "Generic 2D Oscillator") KURAMOTO = (models.ModelsEnum.KURAMOTO.get_class(), "Kuramoto Oscillator") SUP_HOPF = (models.ModelsEnum.SUP_HOPF.get_class(), "Suphopf") HOPFIELD = (models.ModelsEnum.HOPFIELD.get_class(), "Hopfield") EPILEPTOR = (models.ModelsEnum.EPILEPTOR.get_class(), "Epileptor") EPILEPTOR_2D = (models.ModelsEnum.EPILEPTOR_2D.get_class(), "Epileptor2D") EPILEPTOR_CODIM_3 = (models.ModelsEnum.EPILEPTOR_CODIM_3.get_class(), "Epileptor Codim 3") EPILEPTOR_CODIM_3_SLOW = ( models.ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class(), "Epileptor Codim 3 Ultra-Slow Modulations") EPILEPTOR_RS = (models.ModelsEnum.EPILEPTOR_RS.get_class(), "Epileptor Resting State") JANSEN_RIT = (models.ModelsEnum.JANSEN_RIT.get_class(), "Jansen-Rit") ZETTERBERG_JANSEN = (models.ModelsEnum.ZETTERBERG_JANSEN.get_class(), "Zetterberg-Jansen") REDUCED_WONG_WANG = (models.ModelsEnum.REDUCED_WONG_WANG.get_class(), "Reduced Wong-Wang") REDUCED_WONG_WANG_EXC_INH = (models.ModelsEnum.REDUCED_WONG_WANG_EXC_INH.get_class(), "Reduced Wong-Wang With Excitatory And Inhibitory Coupled Populations") REDUCED_SET_FITZ_HUGH_NAGUMO = (models.ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class(), "Stefanescu-Jirsa 2D") REDUCED_SET_HINDMARSH_ROSE = (models.ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class(), "Stefanescu-Jirsa 3D") ZERLAUT_FIRST_ORDER = (models.ModelsEnum.ZERLAUT_FIRST_ORDER.get_class(), "Zerlaut Adaptation First Order") ZERLAUT_SECOND_ORDER = (models.ModelsEnum.ZERLAUT_SECOND_ORDER.get_class(), "Zerlaut Adaptation Second Order") MONTBRIO_PAZO_ROXIN = (models.ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class(), "Montbrio Pazo Roxin") COOMBES_BYRNE = (models.ModelsEnum.COOMBES_BYRNE.get_class(), "Coombes Byrne") COOMBES_BYRNE_2D = (models.ModelsEnum.COOMBES_BYRNE_2D.get_class(), "Coombes Byrne 2D") GAST_SCHMIDT_KNOSCHE_SD = (models.ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class(), "Gast Schmidt Knosche_Sd") GAST_SCHMIDT_KNOSCHE_SF = (models.ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class(), "Gast Schmidt Knosche_Sf") DUMONT_GUTKIN = (models.ModelsEnum.DUMONT_GUTKIN.get_class(), "Dumont Gutkin") LINEAR = (models.ModelsEnum.LINEAR.get_class(), "Linear Model") WILSON_COWAN = (models.ModelsEnum.WILSON_COWAN.get_class(), "Wilson-Cowan") LARTER_BREAKSPEAR = (models.ModelsEnum.LARTER_BREAKSPEAR.get_class(), "Larter-Breakspear")
[docs]def get_model_to_form_dict(): model_class_to_form = { ModelsEnum.GENERIC_2D_OSCILLATOR.value: Generic2dOscillatorModelForm, ModelsEnum.KURAMOTO.value: KuramotoModelForm, ModelsEnum.SUP_HOPF.value: SupHopfModelForm, ModelsEnum.HOPFIELD.value: HopfieldModelForm, ModelsEnum.EPILEPTOR.value: EpileptorModelForm, ModelsEnum.EPILEPTOR_2D.value: Epileptor2DModelForm, ModelsEnum.EPILEPTOR_CODIM_3.value: EpileptorCodim3ModelForm, ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value: EpileptorCodim3SlowModModelForm, ModelsEnum.EPILEPTOR_RS.value: EpileptorRestingStateModelForm, ModelsEnum.JANSEN_RIT.value: JansenRitModelForm, ModelsEnum.ZETTERBERG_JANSEN.value: ZetterbergJansenModelForm, ModelsEnum.REDUCED_WONG_WANG.value: ReducedWongWangModelForm, ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value: ReducedWongWangExcInhModelForm, ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value: ReducedSetFitzHughNagumoModelForm, ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value: ReducedSetHindmarshRoseModelForm, ModelsEnum.ZERLAUT_FIRST_ORDER.value: ZerlautAdaptationFirstOrderModelForm, ModelsEnum.ZERLAUT_SECOND_ORDER.value: ZerlautAdaptationSecondOrderModelForm, ModelsEnum.MONTBRIO_PAZO_ROXIN.value: MontbrioPazoRoxinModelForm, ModelsEnum.COOMBES_BYRNE.value: CoombesByrneModelForm, ModelsEnum.COOMBES_BYRNE_2D.value: CoombesByrne2DModelForm, ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value: GastSchmidtKnoscheSDModelForm, ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value: GastSchmidtKnoscheSFModelForm, ModelsEnum.DUMONT_GUTKIN.value: DumontGutkinModelForm, ModelsEnum.LINEAR.value: LinearModelForm, ModelsEnum.WILSON_COWAN.value: WilsonCowanModelForm, ModelsEnum.LARTER_BREAKSPEAR.value: LarterBreakspearModelForm } return model_class_to_form
[docs]def get_form_for_model(model_class): return get_model_to_form_dict().get(model_class)
[docs]class StateVariableRangesForm(Form): def __init__(self): super(StateVariableRangesForm, self).__init__()
[docs]class ModelForm(FormWithRanges): def __init__(self, are_voi_disabled=False): super(ModelForm, self).__init__() self.are_voi_disabled = are_voi_disabled
[docs] def fill_from_trait(self, trait): # type: (Model) -> None super(ModelForm, self).fill_from_trait(trait) if self.are_voi_disabled: self.variables_of_interest.disabled = True
[docs] @staticmethod def get_params_configurable_in_phase_plane(): """ Returns the configurable parameters in phase plane. """ raise NotImplementedError
[docs]class Generic2dOscillatorModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(Generic2dOscillatorModelForm, self).__init__(are_voi_disabled) self.tau = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.tau) self.I = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.I) self.a = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.a) self.b = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.b) self.c = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.c) self.d = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.d) self.e = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.e) self.f = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.f) self.g = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.g) self.alpha = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.alpha) self.beta = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.beta) self.gamma = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.value.gamma) self.variables_of_interest = MultiSelectField( ModelsEnum.GENERIC_2D_OSCILLATOR.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.tau, self.a, self.b, self.c, self.I, self.d, self.e, self.f, self.g, self.alpha, self.beta, self.gamma]
[docs]class KuramotoModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(KuramotoModelForm, self).__init__(are_voi_disabled) self.omega = ArrayField(ModelsEnum.KURAMOTO.value.omega) self.variables_of_interest = MultiSelectField(ModelsEnum.KURAMOTO.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.omega]
[docs]class SupHopfModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(SupHopfModelForm, self).__init__(are_voi_disabled) self.a = ArrayField(ModelsEnum.SUP_HOPF.value.a) self.omega = ArrayField(ModelsEnum.SUP_HOPF.value.omega) self.variables_of_interest = MultiSelectField(ModelsEnum.SUP_HOPF.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.a, self.omega]
[docs]class HopfieldModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(HopfieldModelForm, self).__init__(are_voi_disabled) self.taux = ArrayField(ModelsEnum.HOPFIELD.value.taux) self.tauT = ArrayField(ModelsEnum.HOPFIELD.value.tauT) self.dynamic = ArrayField(ModelsEnum.HOPFIELD.value.dynamic) self.variables_of_interest = MultiSelectField(ModelsEnum.HOPFIELD.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.taux, self.tauT, self.dynamic]
[docs]class EpileptorModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(EpileptorModelForm, self).__init__(are_voi_disabled) self.a = ArrayField(ModelsEnum.EPILEPTOR.value.a) self.b = ArrayField(ModelsEnum.EPILEPTOR.value.b) self.c = ArrayField(ModelsEnum.EPILEPTOR.value.c) self.d = ArrayField(ModelsEnum.EPILEPTOR.value.d) self.r = ArrayField(ModelsEnum.EPILEPTOR.value.r) self.s = ArrayField(ModelsEnum.EPILEPTOR.value.s) self.x0 = ArrayField(ModelsEnum.EPILEPTOR.value.x0) self.Iext = ArrayField(ModelsEnum.EPILEPTOR.value.Iext) self.slope = ArrayField(ModelsEnum.EPILEPTOR.value.slope) self.Iext2 = ArrayField(ModelsEnum.EPILEPTOR.value.Iext2) self.tau = ArrayField(ModelsEnum.EPILEPTOR.value.tau) self.aa = ArrayField(ModelsEnum.EPILEPTOR.value.aa) self.bb = ArrayField(ModelsEnum.EPILEPTOR.value.bb) self.Kvf = ArrayField(ModelsEnum.EPILEPTOR.value.Kvf) self.Kf = ArrayField(ModelsEnum.EPILEPTOR.value.Kf) self.Ks = ArrayField(ModelsEnum.EPILEPTOR.value.Ks) self.tt = ArrayField(ModelsEnum.EPILEPTOR.value.tt) self.modification = ArrayField(ModelsEnum.EPILEPTOR.value.modification) self.variables_of_interest = MultiSelectField(ModelsEnum.EPILEPTOR.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.Iext, self.Iext2, self.r, self.x0, self.slope]
[docs]class Epileptor2DModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(Epileptor2DModelForm, self).__init__(are_voi_disabled) self.a = ArrayField(ModelsEnum.EPILEPTOR_2D.value.a) self.b = ArrayField(ModelsEnum.EPILEPTOR_2D.value.b) self.c = ArrayField(ModelsEnum.EPILEPTOR_2D.value.c) self.d = ArrayField(ModelsEnum.EPILEPTOR_2D.value.d) self.r = ArrayField(ModelsEnum.EPILEPTOR_2D.value.r) self.x0 = ArrayField(ModelsEnum.EPILEPTOR_2D.value.x0) self.Iext = ArrayField(ModelsEnum.EPILEPTOR_2D.value.Iext) self.slope = ArrayField(ModelsEnum.EPILEPTOR_2D.value.slope) self.Kvf = ArrayField(ModelsEnum.EPILEPTOR_2D.value.Kvf) self.Ks = ArrayField(ModelsEnum.EPILEPTOR_2D.value.Ks) self.tt = ArrayField(ModelsEnum.EPILEPTOR_2D.value.tt) self.modification = ArrayField(ModelsEnum.EPILEPTOR_2D.value.modification) self.variables_of_interest = MultiSelectField(ModelsEnum.EPILEPTOR_2D.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.r, self.Iext, self.x0]
[docs]class EpileptorCodim3ModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(EpileptorCodim3ModelForm, self).__init__(are_voi_disabled) self.mu1_start = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.mu1_start) self.mu2_start = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.mu2_start) self.nu_start = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.nu_start) self.mu1_stop = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.mu1_stop) self.mu2_stop = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.mu2_stop) self.nu_stop = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.nu_stop) self.b = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.b) self.R = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.R) self.c = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.c) self.dstar = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.dstar) self.Ks = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.Ks) self.N = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.N) self.modification = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.value.modification) self.variables_of_interest = MultiSelectField(ModelsEnum.EPILEPTOR_CODIM_3.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.mu1_start, self.mu2_start, self.nu_start, self.mu1_stop, self.mu2_stop, self.nu_stop, self.b, self.R, self.c, self.dstar, self.N, self.Ks]
[docs]class EpileptorCodim3SlowModModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(EpileptorCodim3SlowModModelForm, self).__init__(are_voi_disabled) self.mu1_Ain = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.mu1_Ain) self.mu2_Ain = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.mu2_Ain) self.nu_Ain = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.nu_Ain) self.mu1_Bin = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.mu1_Bin) self.mu2_Bin = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.mu2_Bin) self.nu_Bin = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.nu_Bin) self.mu1_Aend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.mu1_Aend) self.mu2_Aend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.mu2_Aend) self.nu_Aend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.nu_Aend) self.mu1_Bend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.mu1_Bend) self.mu2_Bend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.mu2_Bend) self.nu_Bend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.nu_Bend) self.b = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.b) self.R = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.R) self.c = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.c) self.cA = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.cA) self.cB = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.cB) self.dstar = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.dstar) self.Ks = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.Ks) self.N = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.N) self.modification = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.modification) self.variables_of_interest = MultiSelectField( ModelsEnum.EPILEPTOR_CODIM_3_SLOW.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.mu1_Ain, self.mu2_Ain, self.nu_Ain, self.mu1_Bin, self.mu2_Bin, self.nu_Bin, self.mu1_Aend, self.mu2_Aend, self.nu_Aend, self.mu1_Bend, self.mu2_Bend, self.nu_Bend, self.b, self.R, self.c, self.dstar, self.N]
[docs]class EpileptorRestingStateModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(EpileptorRestingStateModelForm, self).__init__(are_voi_disabled) self.a = ArrayField(ModelsEnum.EPILEPTOR_RS.value.a) self.b = ArrayField(ModelsEnum.EPILEPTOR_RS.value.b) self.c = ArrayField(ModelsEnum.EPILEPTOR_RS.value.c) self.d = ArrayField(ModelsEnum.EPILEPTOR_RS.value.d) self.r = ArrayField(ModelsEnum.EPILEPTOR_RS.value.r) self.s = ArrayField(ModelsEnum.EPILEPTOR_RS.value.s) self.x0 = ArrayField(ModelsEnum.EPILEPTOR_RS.value.x0) self.Iext = ArrayField(ModelsEnum.EPILEPTOR_RS.value.Iext) self.slope = ArrayField(ModelsEnum.EPILEPTOR_RS.value.slope) self.Iext2 = ArrayField(ModelsEnum.EPILEPTOR_RS.value.Iext2) self.tau = ArrayField(ModelsEnum.EPILEPTOR_RS.value.tau) self.aa = ArrayField(ModelsEnum.EPILEPTOR_RS.value.aa) self.bb = ArrayField(ModelsEnum.EPILEPTOR_RS.value.bb) self.Kvf = ArrayField(ModelsEnum.EPILEPTOR_RS.value.Kvf) self.Kf = ArrayField(ModelsEnum.EPILEPTOR_RS.value.Kf) self.Ks = ArrayField(ModelsEnum.EPILEPTOR_RS.value.Ks) self.tt = ArrayField(ModelsEnum.EPILEPTOR_RS.value.tt) self.tau_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.tau_rs) self.I_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.I_rs) self.a_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.a_rs) self.b_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.b_rs) self.d_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.d_rs) self.e_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.e_rs) self.f_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.f_rs) self.alpha_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.alpha_rs) self.beta_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.beta_rs) self.K_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.value.K_rs) self.p = ArrayField(ModelsEnum.EPILEPTOR_RS.value.p) self.variables_of_interest = MultiSelectField(ModelsEnum.EPILEPTOR_RS.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.Iext, self.Iext2, self.r, self.x0, self.slope, self.tau_rs, self.a_rs, self.b_rs, self.I_rs, self.d_rs, self.e_rs, self.f_rs, self.alpha_rs, self.beta_rs]
[docs]class JansenRitModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(JansenRitModelForm, self).__init__(are_voi_disabled) self.A = ArrayField(ModelsEnum.JANSEN_RIT.value.A) self.B = ArrayField(ModelsEnum.JANSEN_RIT.value.B) self.a = ArrayField(ModelsEnum.JANSEN_RIT.value.a) self.b = ArrayField(ModelsEnum.JANSEN_RIT.value.b) self.v0 = ArrayField(ModelsEnum.JANSEN_RIT.value.v0) self.nu_max = ArrayField(ModelsEnum.JANSEN_RIT.value.nu_max) self.r = ArrayField(ModelsEnum.JANSEN_RIT.value.r) self.J = ArrayField(ModelsEnum.JANSEN_RIT.value.J) self.a_1 = ArrayField(ModelsEnum.JANSEN_RIT.value.a_1) self.a_2 = ArrayField(ModelsEnum.JANSEN_RIT.value.a_2) self.a_3 = ArrayField(ModelsEnum.JANSEN_RIT.value.a_3) self.a_4 = ArrayField(ModelsEnum.JANSEN_RIT.value.a_4) self.p_min = ArrayField(ModelsEnum.JANSEN_RIT.value.p_min) self.p_max = ArrayField(ModelsEnum.JANSEN_RIT.value.p_max) self.mu = ArrayField(ModelsEnum.JANSEN_RIT.value.mu) self.variables_of_interest = MultiSelectField(ModelsEnum.JANSEN_RIT.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.A, self.B, self.a, self.b, self.v0, self.nu_max, self.r, self.J, self.a_1, self.a_2, self.a_3, self.a_4, self.p_min, self.p_max, self.mu]
[docs]class ZetterbergJansenModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(ZetterbergJansenModelForm, self).__init__(are_voi_disabled) self.He = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.He) self.Hi = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.Hi) self.ke = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.ke) self.ki = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.ki) self.e0 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.e0) self.rho_2 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.rho_2) self.rho_1 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.rho_1) self.gamma_1 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.gamma_1) self.gamma_2 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.gamma_2) self.gamma_3 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.gamma_3) self.gamma_4 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.gamma_4) self.gamma_5 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.gamma_5) self.gamma_1T = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.gamma_1T) self.gamma_2T = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.gamma_2T) self.gamma_3T = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.gamma_3T) self.P = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.P) self.U = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.U) self.Q = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.value.Q) self.variables_of_interest = MultiSelectField(ModelsEnum.ZETTERBERG_JANSEN.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.He, self.Hi, self.ke, self.ki, self.e0, self.rho_2, self.rho_1, self.gamma_1, self.gamma_2, self.gamma_3, self.gamma_4, self.gamma_5, self.P, self.U, self.Q]
[docs]class ReducedWongWangModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(ReducedWongWangModelForm, self).__init__(are_voi_disabled) self.a = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.a) self.b = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.b) self.d = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.d) self.gamma = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.gamma) self.tau_s = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.tau_s) self.w = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.w) self.J_N = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.J_N) self.I_o = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.I_o) self.sigma_noise = ArrayField(ModelsEnum.REDUCED_WONG_WANG.value.sigma_noise) self.variables_of_interest = MultiSelectField(ModelsEnum.REDUCED_WONG_WANG.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.a, self.b, self.d, self.gamma, self.tau_s, self.w, self.J_N, self.I_o]
[docs]class ReducedWongWangExcInhModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(ReducedWongWangExcInhModelForm, self).__init__(are_voi_disabled) self.a_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.a_e) self.b_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.b_e) self.d_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.d_e) self.gamma_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.gamma_e) self.tau_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.tau_e) self.w_p = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.w_p) self.J_N = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.J_N) self.W_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.W_e) self.a_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.a_i) self.b_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.b_i) self.d_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.d_i) self.gamma_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.gamma_i) self.tau_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.tau_i) self.J_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.J_i) self.W_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.W_i) self.I_o = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.I_o) self.G = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.G) self.lamda = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.lamda) self.variables_of_interest = MultiSelectField( ModelsEnum.REDUCED_WONG_WANG_EXC_INH.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.a_e, self.b_e, self.d_e, self.gamma_e, self.tau_e, self.W_e, self.w_p, self.J_N, self.a_i, self.b_i, self.d_i, self.gamma_i, self.tau_i, self.W_i, self.J_i, self.I_o, self.G, self.lamda]
[docs]class ReducedSetFitzHughNagumoModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(ReducedSetFitzHughNagumoModelForm, self).__init__(are_voi_disabled) self.tau = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.tau) self.a = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.a) self.b = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.b) self.K11 = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.K11) self.K12 = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.K12) self.K21 = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.K21) self.sigma = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.sigma) self.mu = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.mu) self.variables_of_interest = MultiSelectField( ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.tau, self.a, self.b, self.K11, self.K12, self.K21, self.sigma, self.mu]
[docs]class ReducedSetHindmarshRoseModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(ReducedSetHindmarshRoseModelForm, self).__init__(are_voi_disabled) self.r = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.r) self.a = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.a) self.b = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.b) self.c = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.c) self.d = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.d) self.s = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.s) self.xo = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.xo) self.K11 = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.K11) self.K12 = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.K12) self.K21 = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.K21) self.sigma = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.sigma) self.mu = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.mu) self.variables_of_interest = MultiSelectField( ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.r, self.a, self.b, self.c, self.d, self.s, self.xo, self.K11, self.K12, self.K21, self.sigma, self.mu]
[docs]class ZerlautAdaptationFirstOrderModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(ZerlautAdaptationFirstOrderModelForm, self).__init__(are_voi_disabled) self.g_L = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.g_L) self.E_L_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.E_L_e) self.E_L_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.E_L_i) self.C_m = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.C_m) self.b_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.b_e) self.b_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.b_i) self.a_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.a_e) self.a_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.a_i) self.tau_w_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.tau_w_e) self.tau_w_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.tau_w_i) self.E_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.E_e) self.E_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.E_i) self.Q_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.Q_e) self.Q_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.Q_i) self.tau_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.tau_e) self.tau_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.tau_i) self.N_tot = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.N_tot) self.p_connect_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.p_connect_e) self.p_connect_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.p_connect_i) self.g = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.g) self.K_ext_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.K_ext_e) self.K_ext_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.K_ext_i) self.T = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.T) self.P_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.P_e) self.P_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.P_i) self.external_input_ex_ex = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.external_input_ex_ex) self.external_input_ex_in = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.external_input_ex_in) self.external_input_in_ex = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.external_input_in_ex) self.external_input_in_in = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.external_input_in_in) self.tau_OU = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.tau_OU) self.weight_noise = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.weight_noise) self.S_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.S_i) self.variables_of_interest = MultiSelectField(ModelsEnum.ZERLAUT_FIRST_ORDER.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.g_L, self.E_L_e, self.E_L_i, self.C_m, self.b_e, self.b_i, self.a_e, self.a_i, self.tau_w_e, self.tau_w_i, self.E_e, self.E_i, self.Q_e, self.Q_i, self.tau_e, self.tau_i, self.N_tot, self.p_connect_e, self.p_connect_i, self.g, self.K_ext_e, self.K_ext_i, self.T, self.external_input_ex_ex, self.external_input_ex_in, self.external_input_in_ex, self.external_input_in_in, self.tau_OU, self.weight_noise, self.S_i]
[docs]class ZerlautAdaptationSecondOrderModelForm(ZerlautAdaptationFirstOrderModelForm): def __init__(self, are_voi_disabled=False): super(ZerlautAdaptationSecondOrderModelForm, self).__init__(are_voi_disabled)
[docs]class MontbrioPazoRoxinModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(MontbrioPazoRoxinModelForm, self).__init__(are_voi_disabled) self.tau = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.tau) self.I = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.I) self.Delta = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.Delta) self.J = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.J) self.eta = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.eta) self.Gamma = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.Gamma) self.cr = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.cr) self.cv = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.cv) self.variables_of_interest = MultiSelectField(ModelsEnum.MONTBRIO_PAZO_ROXIN.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.tau, self.I, self.Delta, self.J, self.eta, self.Gamma, self.cr, self.cv]
[docs]class CoombesByrneModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(CoombesByrneModelForm, self).__init__(are_voi_disabled) self.Delta = ArrayField(ModelsEnum.COOMBES_BYRNE.value.Delta) self.alpha = ArrayField(ModelsEnum.COOMBES_BYRNE.value.alpha) self.v_syn = ArrayField(ModelsEnum.COOMBES_BYRNE.value.v_syn) self.k = ArrayField(ModelsEnum.COOMBES_BYRNE.value.k) self.eta = ArrayField(ModelsEnum.COOMBES_BYRNE.value.eta) self.variables_of_interest = MultiSelectField(ModelsEnum.COOMBES_BYRNE.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.Delta, self.alpha, self.v_syn, self.k, self.eta]
[docs]class CoombesByrne2DModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(CoombesByrne2DModelForm, self).__init__(are_voi_disabled) self.Delta = ArrayField(ModelsEnum.COOMBES_BYRNE_2D.value.Delta) self.v_syn = ArrayField(ModelsEnum.COOMBES_BYRNE_2D.value.v_syn) self.k = ArrayField(ModelsEnum.COOMBES_BYRNE_2D.value.k) self.eta = ArrayField(ModelsEnum.COOMBES_BYRNE_2D.value.eta) self.variables_of_interest = MultiSelectField(ModelsEnum.COOMBES_BYRNE_2D.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.Delta, self.v_syn, self.k, self.eta]
[docs]class GastSchmidtKnoscheSDModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(GastSchmidtKnoscheSDModelForm, self).__init__(are_voi_disabled) self.tau = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.tau) self.tau_A = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.tau_A) self.alpha = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.alpha) self.I = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.I) self.Delta = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.Delta) self.J = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.J) self.eta = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.eta) self.cr = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.cr) self.cv = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.cv) self.variables_of_interest = MultiSelectField( ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.tau, self.tau_A, self.alpha, self.I, self.Delta, self.J, self.eta, self.cr, self.cv]
[docs]class GastSchmidtKnoscheSFModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(GastSchmidtKnoscheSFModelForm, self).__init__(are_voi_disabled) self.tau = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.tau) self.tau_A = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.tau_A) self.alpha = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.alpha) self.I = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.I) self.Delta = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.Delta) self.J = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.J) self.eta = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.eta) self.cr = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.cr) self.cv = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.cv) self.variables_of_interest = MultiSelectField( ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.tau, self.tau_A, self.alpha, self.I, self.Delta, self.J, self.eta, self.cr, self.cv]
[docs]class DumontGutkinModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(DumontGutkinModelForm, self).__init__(are_voi_disabled) self.I_e = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.I_e) self.Delta_e = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.Delta_e) self.eta_e = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.eta_e) self.tau_e = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.tau_e) self.I_i = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.I_i) self.Delta_i = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.Delta_i) self.eta_i = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.eta_i) self.tau_i = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.tau_i) self.tau_s = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.tau_s) self.J_ee = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.J_ee) self.J_ei = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.J_ei) self.J_ie = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.J_ie) self.J_ii = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.J_ii) self.Gamma = ArrayField(ModelsEnum.DUMONT_GUTKIN.value.Gamma) self.variables_of_interest = MultiSelectField(ModelsEnum.DUMONT_GUTKIN.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.I_e, self.Delta_e, self.eta_e, self.tau_e, self.I_i, self.Delta_i, self.eta_i, self.tau_i, self.tau_s, self.J_ee, self.J_ei, self.J_ie, self.J_ii, self.Gamma]
[docs]class LinearModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(LinearModelForm, self).__init__(are_voi_disabled) self.gamma = ArrayField(ModelsEnum.LINEAR.value.gamma) self.variables_of_interest = MultiSelectField(ModelsEnum.LINEAR.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.gamma]
[docs]class WilsonCowanModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(WilsonCowanModelForm, self).__init__(are_voi_disabled) self.c_ee = ArrayField(ModelsEnum.WILSON_COWAN.value.c_ee) self.c_ie = ArrayField(ModelsEnum.WILSON_COWAN.value.c_ie) self.c_ei = ArrayField(ModelsEnum.WILSON_COWAN.value.c_ei) self.c_ii = ArrayField(ModelsEnum.WILSON_COWAN.value.c_ii) self.tau_e = ArrayField(ModelsEnum.WILSON_COWAN.value.tau_e) self.tau_i = ArrayField(ModelsEnum.WILSON_COWAN.value.tau_i) self.a_e = ArrayField(ModelsEnum.WILSON_COWAN.value.a_e) self.b_e = ArrayField(ModelsEnum.WILSON_COWAN.value.b_e) self.c_e = ArrayField(ModelsEnum.WILSON_COWAN.value.c_e) self.theta_e = ArrayField(ModelsEnum.WILSON_COWAN.value.theta_e) self.a_i = ArrayField(ModelsEnum.WILSON_COWAN.value.a_i) self.b_i = ArrayField(ModelsEnum.WILSON_COWAN.value.b_i) self.theta_i = ArrayField(ModelsEnum.WILSON_COWAN.value.theta_i) self.c_i = ArrayField(ModelsEnum.WILSON_COWAN.value.c_i) self.r_e = ArrayField(ModelsEnum.WILSON_COWAN.value.r_e) self.r_i = ArrayField(ModelsEnum.WILSON_COWAN.value.r_i) self.k_e = ArrayField(ModelsEnum.WILSON_COWAN.value.k_e) self.k_i = ArrayField(ModelsEnum.WILSON_COWAN.value.k_i) self.P = ArrayField(ModelsEnum.WILSON_COWAN.value.P) self.Q = ArrayField(ModelsEnum.WILSON_COWAN.value.Q) self.alpha_e = ArrayField(ModelsEnum.WILSON_COWAN.value.alpha_e) self.alpha_i = ArrayField(ModelsEnum.WILSON_COWAN.value.alpha_i) self.variables_of_interest = MultiSelectField(ModelsEnum.WILSON_COWAN.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.c_ee, self.c_ei, self.c_ie, self.c_ii, self.tau_e, self.tau_i, self.a_e, self.b_e, self.c_e, self.a_i, self.b_i, self.c_i, self.r_e, self.r_i, self.k_e, self.k_i, self.P, self.Q, self.theta_e, self.theta_i, self.alpha_e, self.alpha_i]
[docs]class LarterBreakspearModelForm(ModelForm): def __init__(self, are_voi_disabled=False): super(LarterBreakspearModelForm, self).__init__(are_voi_disabled) self.gCa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.gCa) self.gK = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.gK) self.gL = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.gL) self.phi = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.phi) self.gNa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.gNa) self.TK = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.TK) self.TCa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.TCa) self.TNa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.TNa) self.VCa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.VCa) self.VK = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.VK) self.VL = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.VL) self.VNa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.VNa) self.d_K = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.d_K) self.tau_K = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.tau_K) self.d_Na = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.d_Na) self.d_Ca = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.d_Ca) self.aei = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.aei) self.aie = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.aie) self.b = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.b) self.C = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.C) self.ane = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.ane) self.ani = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.ani) self.aee = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.aee) self.Iext = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.Iext) self.rNMDA = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.rNMDA) self.VT = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.VT) self.d_V = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.d_V) self.ZT = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.ZT) self.d_Z = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.d_Z) self.QV_max = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.QV_max) self.QZ_max = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.QZ_max) self.t_scale = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.value.t_scale) self.variables_of_interest = MultiSelectField(ModelsEnum.LARTER_BREAKSPEAR.value.variables_of_interest)
[docs] def get_params_configurable_in_phase_plane(self): return [self.gCa, self.gK, self.gL, self.phi, self.gNa, self.TK, self.TCa, self.TNa, self.VCa, self.VK, self.VL, self.VNa, self.d_K, self.tau_K, self.d_Na, self.d_Ca, self.aei, self.aie, self.b, self.C, self.ane, self.ani, self.aee, self.Iext, self.rNMDA, self.VT, self.d_V, self.ZT, self.d_Z, self.QV_max, self.QZ_max, self.t_scale]