Source code for tvb.adapters.forms.coupling_forms
# -*- coding: utf-8 -*-
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# TheVirtualBrain-Framework Package. This package holds all Data Management, and
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from tvb.basic.neotraits.api import TupleEnum
from tvb.simulator.coupling import *
from tvb.adapters.forms.form_with_ranges import FormWithRanges
from tvb.core.neotraits.forms import ArrayField, BoolField
[docs]class CouplingFunctionsEnum(TupleEnum):
LINEAR = (Linear, "Linear")
SCALING = (Scaling, "Scaling")
HYPERBOLIC_TANGENT = (HyperbolicTangent, "Hyperbolictangent")
SIGMOIDAL = (Sigmoidal, "Sigmoidal")
SIGMOIDAL_JANSEN_RIT = (SigmoidalJansenRit, "Sigmoidaljansenrit")
PRESIGMOIDAL = (PreSigmoidal, "Presigmoidal")
DIFFERENCE = (Difference, "Difference")
KURAMOTO = (Kuramoto, "Kuramoto")
[docs]def get_coupling_to_form_dict():
coupling_class_to_form = {
Linear: LinearCouplingForm,
Scaling: ScalingCouplingForm,
HyperbolicTangent: HyperbolicTangentCouplingForm,
Sigmoidal: SigmoidalCouplingForm,
SigmoidalJansenRit: SigmoidalJansenRitForm,
PreSigmoidal: PreSigmoidalCouplingForm,
Difference: DifferenceCouplingForm,
Kuramoto: KuramotoCouplingForm
}
return coupling_class_to_form
[docs]def get_form_for_coupling(coupling_class):
return get_coupling_to_form_dict().get(coupling_class)
[docs]class LinearCouplingForm(FormWithRanges):
def __init__(self):
super(LinearCouplingForm, self).__init__()
self.a = ArrayField(Linear.a)
self.b = ArrayField(Linear.b)
[docs]class ScalingCouplingForm(FormWithRanges):
def __init__(self):
super(ScalingCouplingForm, self).__init__()
self.a = ArrayField(Scaling.a)
[docs]class HyperbolicTangentCouplingForm(FormWithRanges):
def __init__(self):
super(HyperbolicTangentCouplingForm, self).__init__()
self.a = ArrayField(HyperbolicTangent.a)
self.b = ArrayField(HyperbolicTangent.b)
self.midpoint = ArrayField(HyperbolicTangent.midpoint)
self.sigma = ArrayField(HyperbolicTangent.sigma)
[docs]class SigmoidalCouplingForm(FormWithRanges):
def __init__(self):
super(SigmoidalCouplingForm, self).__init__()
self.cmin = ArrayField(Sigmoidal.cmin)
self.cmax = ArrayField(Sigmoidal.cmax)
self.midpoint = ArrayField(Sigmoidal.midpoint)
self.a = ArrayField(Sigmoidal.a)
self.sigma = ArrayField(Sigmoidal.sigma)
[docs]class SigmoidalJansenRitForm(FormWithRanges):
def __init__(self):
super(SigmoidalJansenRitForm, self).__init__()
self.cmin = ArrayField(SigmoidalJansenRit.cmin)
self.cmax = ArrayField(SigmoidalJansenRit.cmax)
self.midpoint = ArrayField(SigmoidalJansenRit.midpoint)
self.r = ArrayField(SigmoidalJansenRit.r)
self.a = ArrayField(SigmoidalJansenRit.a)
[docs]class PreSigmoidalCouplingForm(FormWithRanges):
def __init__(self):
super(PreSigmoidalCouplingForm, self).__init__()
self.H = ArrayField(PreSigmoidal.H)
self.Q = ArrayField(PreSigmoidal.Q)
self.G = ArrayField(PreSigmoidal.G)
self.P = ArrayField(PreSigmoidal.P)
self.theta = ArrayField(PreSigmoidal.theta)
self.dynamic = BoolField(PreSigmoidal.dynamic)
self.globalT= BoolField(PreSigmoidal.globalT)
[docs]class DifferenceCouplingForm(FormWithRanges):
def __init__(self):
super(DifferenceCouplingForm, self).__init__()
self.a = ArrayField(Difference.a)
[docs]class KuramotoCouplingForm(FormWithRanges):
def __init__(self):
super(KuramotoCouplingForm, self).__init__()
self.a = ArrayField(Kuramoto.a)