Index

_

__call__() (tvb.simulator.coupling.Coupling.PreSigmoidal method)

__init__() (tvb.basic.neotraits.api.Attr method) (tvb.basic.neotraits.api.Final method) (tvb.basic.neotraits.api.NArray method) (tvb.contrib.simulator.models.generic_2d_oscillator.Generic2dOscillator method) (tvb.simulator.noise.Noise method)

A

a (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) (tvb.contrib.simulator.models.generic_2d_oscillator.Generic2dOscillator attribute) (tvb.contrib.simulator.models.hindmarsh_rose.HindmarshRose attribute) (tvb.contrib.simulator.models.wong_wang.WongWang attribute) (tvb.simulator.coupling.Difference attribute) (tvb.simulator.coupling.HyperbolicTangent attribute) (tvb.simulator.coupling.Kuramoto attribute) (tvb.simulator.coupling.Linear attribute) (tvb.simulator.coupling.Scaling attribute) (tvb.simulator.coupling.Sigmoidal attribute) (tvb.simulator.coupling.SigmoidalJansenRit attribute) (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute) A (tvb.simulator.models.jansen_rit.JansenRit attribute) a (tvb.simulator.models.jansen_rit.JansenRit attribute) (tvb.simulator.models.oscillator.Generic2dOscillator attribute) (tvb.simulator.models.oscillator.SupHopf attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) (tvb.simulator.models.wong_wang.ReducedWongWang attribute) a_1 (tvb.simulator.models.jansen_rit.JansenRit attribute) a_2 (tvb.simulator.models.jansen_rit.JansenRit attribute) a_3 (tvb.simulator.models.jansen_rit.JansenRit attribute) a_4 (tvb.simulator.models.jansen_rit.JansenRit attribute) a_e (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) A_ee (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) A_ei (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) a_exc (tvb.contrib.simulator.models.larter.Larter attribute) a_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) A_ik (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) a_inh (tvb.contrib.simulator.models.larter.Larter attribute) aa (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) (tvb.simulator.models.epileptor.Epileptor attribute) ABCAdapter (class in tvb.core.adapters.abcadapter) ABCAdapterForm (class in tvb.core.adapters.abcadapter) ABCDisplayer (class in tvb.core.adapters.abcdisplayer) ABCExporter (class in tvb.adapters.exporters.abcexporter) ABCMappedArraySVGVisualizer (class in tvb.adapters.visualizers.matrix_viewer) ABCRemover (class in tvb.core.adapters.abcremover) ABCSpaceDisplayer (class in tvb.adapters.visualizers.time_series) ABCSurfaceDisplayer (class in tvb.adapters.visualizers.surface_view) ABCUploader (class in tvb.core.adapters.abcuploader) ABCUploaderForm (class in tvb.core.adapters.abcuploader) accepted_filters() (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex static method) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex static method) (tvb.core.entities.model.model_datatype.DataType static method) accepts() (tvb.adapters.exporters.abcexporter.ABCExporter method) ACCESS_MODE_TVB_FILES (tvb.basic.config.profile_settings.BaseSettingsProfile attribute) Accessor (class in tvb.core.neotraits._h5accessors) ACCOUNT_URL (tvb.interfaces.rest.commons.strings.Strings attribute) Action (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) actions (tvb.dsl.NeuroML.lems.model.dynamics.EventHandler attribute) (tvb.dsl_cuda.lems.model.dynamics.EventHandler attribute) AdapterLaunchModeEnum (class in tvb.core.adapters.abcadapter) ADAPTERS (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) add() (tvb.dsl.NeuroML.lems.model.component.Component method) (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl.NeuroML.lems.model.component.FatComponent method) (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl.NeuroML.lems.model.dynamics.ConditionalDerivedVariable method) (tvb.dsl.NeuroML.lems.model.dynamics.Dynamics method) (tvb.dsl.NeuroML.lems.model.dynamics.EventHandler method) (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl.NeuroML.lems.model.simulation.Simulation method) (tvb.dsl.NeuroML.lems.model.structure.MultiInstantiate method) (tvb.dsl.NeuroML.lems.model.structure.Structure method) (tvb.dsl_cuda.lems.model.component.Component method) (tvb.dsl_cuda.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.FatComponent method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.ConditionalDerivedVariable method) (tvb.dsl_cuda.lems.model.dynamics.Dynamics method) (tvb.dsl_cuda.lems.model.dynamics.EventHandler method) (tvb.dsl_cuda.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.simulation.Simulation method) (tvb.dsl_cuda.lems.model.structure.MultiInstantiate method) (tvb.dsl_cuda.lems.model.structure.Structure method) add2session() (in module tvb.interfaces.web.controllers.common) add_action() (tvb.dsl.NeuroML.lems.model.dynamics.EventHandler method) (tvb.dsl_cuda.lems.model.dynamics.EventHandler method) add_assign() (tvb.dsl.NeuroML.lems.model.structure.MultiInstantiate method) (tvb.dsl_cuda.lems.model.structure.MultiInstantiate method) add_attachments() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_axes_range_sliders() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_big_step_back_button() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) add_big_step_forward_button() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) add_case() (tvb.dsl.NeuroML.lems.model.dynamics.ConditionalDerivedVariable method) (tvb.dsl_cuda.lems.model.dynamics.ConditionalDerivedVariable method) add_child() (tvb.adapters.datatypes.db.annotation.AnnotationTerm method) (tvb.dsl.NeuroML.lems.model.component.Component method) (tvb.dsl_cuda.lems.model.component.Component method) add_child_component() (tvb.dsl.NeuroML.lems.model.component.FatComponent method) (tvb.dsl_cuda.lems.model.component.FatComponent method) add_child_instance() (tvb.dsl.NeuroML.lems.model.structure.Structure method) (tvb.dsl_cuda.lems.model.structure.Structure method) add_children() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_component() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) add_component_reference() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_component_requirement() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_component_type() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) add_condition() (tvb.core.entities.filters.chain.FilterChain method) add_conditional_derived_variable() (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) add_connectivity_filter() (tvb.adapters.simulator.range_parameters.SimulatorRangeParameters method) add_constant() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.model.Model method) add_data_display() (tvb.dsl.NeuroML.lems.model.simulation.Simulation method) (tvb.dsl_cuda.lems.model.simulation.Simulation method) add_data_writer() (tvb.dsl.NeuroML.lems.model.simulation.Simulation method) (tvb.dsl_cuda.lems.model.simulation.Simulation method) add_derived_parameter() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_derived_variable() (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) add_dimension() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) add_end_button() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) add_entries_to_config_file() (tvb.basic.config.stored.SettingsManager method) add_event_connection() (tvb.dsl.NeuroML.lems.model.structure.ForEach method) (tvb.dsl.NeuroML.lems.model.structure.Structure method) (tvb.dsl_cuda.lems.model.structure.ForEach method) (tvb.dsl_cuda.lems.model.structure.Structure method) add_event_handler() (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) add_event_port() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_event_record() (tvb.dsl.NeuroML.lems.model.simulation.Simulation method) (tvb.dsl_cuda.lems.model.simulation.Simulation method) add_event_writer() (tvb.dsl.NeuroML.lems.model.simulation.Simulation method) (tvb.dsl_cuda.lems.model.simulation.Simulation method) add_exposure() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_fat_component() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) add_for_each() (tvb.dsl.NeuroML.lems.model.structure.ForEach method) (tvb.dsl.NeuroML.lems.model.structure.Structure method) (tvb.dsl_cuda.lems.model.structure.ForEach method) (tvb.dsl_cuda.lems.model.structure.Structure method) add_function() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_include() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) add_include_directory() (tvb.dsl.NeuroML.lems.model.model.Model method) add_index_parameter() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_instance_requirement() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_kinetic_scheme() (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) add_link() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_members_to_project() (tvb.core.entities.storage.project_dao.CaseDAO method) (tvb.interfaces.rest.client.tvb_client.TVBClient method) (tvb.interfaces.rest.server.facades.project_facade.ProjectFacade method) add_mode_selector() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) add_multi_instantiate() (tvb.dsl.NeuroML.lems.model.structure.Structure method) (tvb.dsl_cuda.lems.model.structure.Structure method) add_noise_slider() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_normalise_power_selector() (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) add_operation_additional_info() (tvb.core.adapters.abcadapter.ABCAdapter method) add_param_sliders() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_parameter() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_path() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_property() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_record() (tvb.dsl.NeuroML.lems.model.simulation.Simulation method) (tvb.dsl_cuda.lems.model.simulation.Simulation method) add_regime() (tvb.dsl.NeuroML.lems.model.dynamics.Dynamics method) (tvb.dsl_cuda.lems.model.dynamics.Dynamics method) add_requirement() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_reset_axes_button() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_reset_noise_button() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_reset_param_button() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_reset_seed_button() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_reset_sv_button() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_run() (tvb.dsl.NeuroML.lems.model.simulation.Simulation method) (tvb.dsl_cuda.lems.model.simulation.Simulation method) add_scaling_slider() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) add_scientific_fields() (tvb.core.entities.transient.context_overlay.CommonDetails method) add_session() (in module tvb.core.entities.storage.session_maker) add_start_button() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) add_state_variable() (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) add_state_variable_selector() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_state_variable_sliders() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) add_step_back_button() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) add_step_forward_button() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) add_surface_filter() (tvb.adapters.simulator.range_parameters.SimulatorRangeParameters method) add_target() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) add_text() (tvb.dsl.NeuroML.lems.model.component.Fat method) (tvb.dsl_cuda.lems.model.component.Fat method) add_time_derivative() (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) add_to_path() (tvb.adapters.analyzers.matlab_worker.MatlabWorker method) add_tunnel() (tvb.dsl.NeuroML.lems.model.structure.Structure method) (tvb.dsl_cuda.lems.model.structure.Structure method) add_unit() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) add_variable_selector() (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method)

add_vertices_and_triangles() (tvb.contrib.scripts.datatypes.surface.Surface method) add_view_model_to_session() (tvb.interfaces.web.entities.context_selected_adapter.SelectedAdapterContext method) add_warning() (tvb.datatypes.surfaces.ValidationResult method) add_window_function_selector() (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) add_window_length_selector() (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) add_window_length_slider() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) add_with() (tvb.dsl.NeuroML.lems.model.structure.Structure method) (tvb.dsl_cuda.lems.model.structure.Structure method) add_xscale_selector() (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) add_yscale_selector() (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) additional_info (tvb.core.entities.model.model_operation.Operation attribute) Additive (class in tvb.simulator.noise) AdditiveNoiseForm (class in tvb.adapters.simulator.noise_forms) AdditiveNoiseViewModel (class in tvb.core.entities.file.simulator.view_model) administrator (tvb.core.entities.model.model_project.Project attribute) ADMINISTRATOR_BLANK_PWD (tvb.basic.config.settings.WebAdminSettings attribute) aee (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) aei (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) after_store() (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex method) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex method) (tvb.core.entities.model.model_datatype.DataType method) aie (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) Aik (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) ALG_CLASSNAME (tvb.interfaces.rest.commons.strings.LinkPlaceholder attribute) ALG_MODULE (tvb.interfaces.rest.commons.strings.LinkPlaceholder attribute) Algorithm (class in tvb.core.entities.model.model_operation) algorithm (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter attribute) (tvb.core.entities.filters.chain.FilterChain attribute) (tvb.core.entities.model.model_operation.Operation attribute) algorithm_category (tvb.core.entities.filters.chain.FilterChain attribute) (tvb.core.entities.model.model_operation.Algorithm attribute) algorithm_category_replacement (tvb.core.entities.filters.chain.FilterChain attribute) algorithm_identifier (tvb.core.entities.model.model_workflow.Portlet attribute) algorithm_replacement (tvb.core.entities.filters.chain.FilterChain attribute) AlgorithmCategory (class in tvb.core.entities.model.model_operation) AlgorithmCategoryConfig (class in tvb.config.algorithm_categories) AlgorithmDto (class in tvb.interfaces.rest.commons.dtos) algorithms (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapterModel attribute) AlgorithmService (class in tvb.core.services.algorithm_service) AlgorithmTransientGroup (class in tvb.core.entities.model.model_operation) ALL (tvb.basic.profile.TvbProfile attribute) all_exporters (tvb.adapters.exporters.export_manager.ExportManager attribute) ALLEN_CREATOR_CLASS (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) ALLEN_CREATOR_MODULE (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) ALLEN_MOUSE_CONNECTIVITY_CACHE_FOLDER (tvb.core.entities.file.files_helper.FilesHelper attribute) AllenConnectModel (class in tvb.adapters.creators.allen_creator) AllenConnectomeBuilder (class in tvb.adapters.creators.allen_creator) AllenConnectomeBuilderForm (class in tvb.adapters.creators.allen_creator) ALLOW_NESTED_TRANSACTIONS (tvb.basic.config.settings.DBSettings attribute) Alpha (class in tvb.datatypes.equations) alpha (tvb.analyzers.fmri_balloon.BalloonModel attribute) (tvb.simulator.models.oscillator.Generic2dOscillator attribute) alpha_e (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) alpha_i (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) AlphaEquationForm (class in tvb.adapters.simulator.equation_forms) amplitude (tvb.datatypes.spectral.FourierSpectrum attribute) (tvb.datatypes.spectral.WaveletCoefficients attribute) analytic() (tvb.simulator.monitors.EEG method) (tvb.simulator.monitors.MEG method) (tvb.simulator.monitors.Projection method) (tvb.simulator.monitors.iEEG method) ANALYZE_HELP_PAGE (tvb.interfaces.web.controllers.help.help_config.HelpConfig attribute) AnalyzeAlgorithmCategoryConfig (class in tvb.config.algorithm_categories) analyzed_datatype (tvb.core.entities.file.simulator.datatype_measure_h5.DatatypeMeasure attribute) ANALYZERS_ONLINE_HELP_SHORTCUTS (tvb.interfaces.web.structure.WebStructure attribute) ane (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) ani (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) annotations_index (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsViewModel attribute) annotations_length (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) AnnotationTerm (class in tvb.adapters.datatypes.db.annotation) any (tvb.basic.neotraits._attr.Dim attribute) append() (tvb.core.neotraits._h5accessors.DataSet method) (tvb.core.neotraits.h5.DataSet method) append_data() (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager method) append_to_path() (tvb.basic.config.environment.Environment method) applied_on (tvb.core.entities.model.model_datatype.StoredPSEFilter attribute) apply_corrections (tvb.adapters.uploaders.nifti_importer.NIFTIImporterModel attribute) apply_equation() (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController method) (tvb.interfaces.web.entities.context_model_parameters.SurfaceContextModelParameters method) apply_focal_point() (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController method) (tvb.interfaces.web.entities.context_model_parameters.SurfaceContextModelParameters method) AREA_TOKEN (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporter attribute) areas (tvb.datatypes.connectivity.Connectivity attribute) areas_volume_threshold() (in module tvb.adapters.creators.allen_creator) array (tvb.simulator.descriptors.NDArray.State attribute) array_data (tvb.adapters.datatypes.h5.structural_h5.VolumetricDataMixin attribute) (tvb.datatypes.fcd.Fcd attribute) (tvb.datatypes.graph.ConnectivityMeasure attribute) (tvb.datatypes.graph.CorrelationCoefficients attribute) (tvb.datatypes.graph.Covariance attribute) (tvb.datatypes.region_mapping.RegionMapping attribute) (tvb.datatypes.region_mapping.RegionVolumeMapping attribute) (tvb.datatypes.spectral.CoherenceSpectrum attribute) (tvb.datatypes.spectral.ComplexCoherenceSpectrum attribute) (tvb.datatypes.spectral.FourierSpectrum attribute) (tvb.datatypes.spectral.WaveletCoefficients attribute) (tvb.datatypes.structural.StructuralMRI attribute) (tvb.datatypes.temporal_correlations.CrossCorrelation attribute) array_data_max (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) array_data_mean (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) array_data_min (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) array_has_complex (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) array_is_finite (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) array_size2kb() (tvb.core.adapters.abcadapter.ABCAdapter method) ArrayField (class in tvb.core.neotraits.forms) arrays_of_dicts_to_dicts_of_ndarrays() (in module tvb.contrib.scripts.utils.data_structures_utils) as_ (tvb.dsl.NeuroML.lems.model.structure.With attribute) (tvb.dsl_cuda.lems.model.structure.With attribute) AsciiValidator (class in tvb.interfaces.web.controllers.settings_controller) ASP_ATTR (tvb.adapters.uploaders.gifti.parser.GIFTIParser attribute) assert_arrays() (in module tvb.contrib.scripts.utils.data_structures_utils) assert_equal_objects() (in module tvb.contrib.scripts.utils.data_structures_utils) Assign (class in tvb.dsl.NeuroML.lems.model.structure) (class in tvb.dsl_cuda.lems.model.structure) assignments (tvb.dsl.NeuroML.lems.model.structure.MultiInstantiate attribute) (tvb.dsl_cuda.lems.model.structure.MultiInstantiate attribute) astr() (in module tvb.simulator.common) ASYNC_DIFF_MEM (tvb.core.adapters.abcadapter.AdapterLaunchModeEnum attribute) async_launch_and_prepare_pse() (tvb.core.services.simulator_service.SimulatorService method) async_launch_and_prepare_simulation() (tvb.core.services.simulator_service.SimulatorService method) async_launch_simulation_on_server() (tvb.core.services.simulator_service.SimulatorService method) ASYNC_OP_LOG_FILE (tvb.config.logger.cluster_handler.ClusterTimedRotatingFileHandler attribute) ATT_UID (tvb.core.services.operation_service.OperationService attribute) Attachments (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) attachments (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) Attr (class in tvb.basic.neotraits._attr) (class in tvb.basic.neotraits.api) ATTR_ONTOLOGY_DEFINITION (tvb.adapters.uploaders.brco.parser.XMLParser attribute) ATTR_ONTOLOGY_LABEL (tvb.adapters.uploaders.brco.parser.XMLParser attribute) ATTR_ONTOLOGY_RELATION (tvb.adapters.uploaders.brco.parser.XMLParser attribute) ATTR_ONTOLOGY_SYN (tvb.adapters.uploaders.brco.parser.XMLParser attribute) ATTR_ONTOLOGY_URI (tvb.adapters.uploaders.brco.parser.XMLParser attribute) ATTR_TVB_ID (tvb.adapters.uploaders.brco.parser.XMLParser attribute) ATTR_TVB_LABEL (tvb.adapters.uploaders.brco.parser.XMLParser attribute) AUTH_HEADER (tvb.interfaces.rest.commons.strings.Strings attribute) AUTH_URL (tvb.interfaces.rest.commons.strings.Strings attribute) AuthorizationManager (class in tvb.core.services.authorization) AuthorizationManagerMeta (class in tvb.core.services.authorization) AuthorizationRequestException auto_docstring() (in module tvb.basic.neotraits.info) average_power (tvb.datatypes.spectral.FourierSpectrum attribute) average_segments (tvb.analyzers.node_complex_coherence.NodeComplexCoherence attribute)

B

b (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) (tvb.contrib.simulator.models.generic_2d_oscillator.Generic2dOscillator attribute) (tvb.contrib.simulator.models.hindmarsh_rose.HindmarshRose attribute) (tvb.contrib.simulator.models.larter.Larter attribute) (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.contrib.simulator.models.wong_wang.WongWang attribute) (tvb.simulator.coupling.HyperbolicTangent attribute) (tvb.simulator.coupling.Linear attribute) (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute) B (tvb.simulator.models.jansen_rit.JansenRit attribute) b (tvb.simulator.models.jansen_rit.JansenRit attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.oscillator.Generic2dOscillator attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) (tvb.simulator.models.wong_wang.ReducedWongWang attribute) (tvb.simulator.noise.Multiplicative attribute) B0 (class in tvb.contrib.scripts.datatypes.structural) b0 (tvb.contrib.scripts.datatypes.head.Head attribute) b_e (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) b_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) B_ik (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) BackendClient (class in tvb.core.services.backend_clients.backend_client) BackendClientFactory (class in tvb.core.services.backend_client_factory) background (tvb.adapters.visualizers.region_volume_mapping.BaseVolumeVisualizerModel attribute) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiserModel attribute) BadRequestException balloon_dfun() (tvb.analyzers.fmri_balloon.BalloonModel method) BalloonModel (class in tvb.analyzers.fmri_balloon) BalloonModelAdapter (class in tvb.adapters.analyzers.fmri_balloon_adapter) BalloonModelAdapterForm (class in tvb.adapters.analyzers.fmri_balloon_adapter) BalloonModelAdapterModel (class in tvb.adapters.analyzers.fmri_balloon_adapter) BASE_MODEL (tvb.simulator.models.ModelsEnum attribute) BASE_PATH (tvb.interfaces.rest.commons.strings.Strings attribute) base_url (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController attribute) (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController attribute) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController attribute) (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController attribute) base_url() (tvb.interfaces.web.controllers.users_controller.UserController method) BASE_VERSION (tvb.basic.config.settings.VersionSettings attribute) BaseBCT (class in tvb.adapters.analyzers.bct_adapters) BaseBCTForm (class in tvb.adapters.analyzers.bct_adapters) BaseBCTModel (class in tvb.adapters.analyzers.bct_adapters) BaseController (class in tvb.interfaces.web.controllers.base_controller) BaseDto (class in tvb.interfaces.rest.commons.dtos) BaseHistory (class in tvb.simulator.history) BaseModel (class in tvb.contrib.scripts.datatypes.base) BaseRestException BaseSettingsProfile (class in tvb.basic.config.profile_settings) BaseStorageException BaseSurfaceViewerForm (class in tvb.adapters.visualizers.surface_view) BaseSurfaceViewerModel (class in tvb.adapters.visualizers.surface_view) BaseTimeseriesMetricAlgorithm (class in tvb.analyzers.metrics_base) BaseUndirected (class in tvb.adapters.analyzers.bct_adapters) BaseUnidirectedBCTForm (class in tvb.adapters.analyzers.bct_adapters) BaseVolumeVisualizerForm (class in tvb.adapters.visualizers.region_volume_mapping) BaseVolumeVisualizerModel (class in tvb.adapters.visualizers.region_volume_mapping) bb (tvb.simulator.models.epileptor.Epileptor attribute) bct_description() (in module tvb.adapters.analyzers.bct_adapters) BEARER (tvb.interfaces.rest.commons.strings.Strings attribute) Behavioral (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) Bench (class in tvb.interfaces.command.benchmark) beta (tvb.simulator.models.oscillator.Generic2dOscillator attribute) beta() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) betweenness_bin() (in module tvb.analyzers.graph) bi_hemispheric (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.datatypes.surfaces.Surface attribute) bigstep_back() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) bigstep_forward() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) Bik (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) BIN_FOLDER (tvb.basic.config.profile_settings.BaseSettingsProfile attribute) binarized_weights (tvb.datatypes.connectivity.Connectivity attribute) binomial() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) Bold (class in tvb.simulator.monitors) bold_model (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapterModel attribute) (tvb.analyzers.fmri_balloon.BalloonModel attribute) BoldMonitorForm (class in tvb.adapters.simulator.monitor_forms)

BoldRegionROI (class in tvb.simulator.monitors) BoldRegionROIMonitorForm (class in tvb.adapters.simulator.monitor_forms) BoldRegionROIViewModel (class in tvb.core.entities.file.simulator.view_model) BoldViewModel (class in tvb.core.entities.file.simulator.view_model) BOOL_VALUE_PREFIX (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager attribute) BoolField (class in tvb.core.neotraits.forms) bound_state() (tvb.simulator.integrators.Integrator method) boundaries (tvb.dsl.NeuroML.lems.model.dynamics.StateVariable attribute) (tvb.dsl_cuda.lems.model.dynamics.StateVariable attribute) bounded_state_variable_indices (tvb.simulator.integrators.Integrator attribute) brain_labels (tvb.contrib.scripts.datatypes.time_series.TimeSeriesBrain attribute) brain_skull (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.datatypes.projections.ProjectionMatrix attribute) BrainSkull (class in tvb.datatypes.surfaces) BrainSkullSurface (class in tvb.contrib.scripts.datatypes.surface) BrainViewer (class in tvb.adapters.visualizers.brain) BrainViewerForm (class in tvb.adapters.visualizers.brain) BrainViewerModel (class in tvb.adapters.visualizers.brain) branch (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) branch_simulation_state_gid (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter attribute) BRCOImporter (class in tvb.adapters.uploaders.brco_importer) BRCOImporterForm (class in tvb.adapters.uploaders.brco_importer) BRCOImporterModel (class in tvb.adapters.uploaders.brco_importer) browser_login() (tvb.interfaces.rest.client.tvb_client.TVBClient method) BrunelWang (class in tvb.contrib.simulator.models.brunel_wang) Buffer (class in tvb.simulator.common) buffer (tvb.simulator.history.DenseHistory attribute) BUFFER_CAPACITY (tvb.config.logger.cluster_handler.ClusterTimedRotatingFileHandler attribute) buffer_data() (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager.H5pyStorageBuffer method) build_adapter() (tvb.core.adapters.abcadapter.ABCAdapter static method) build_adapter_from_class() (tvb.core.adapters.abcadapter.ABCAdapter static method) build_base_h5_url() (tvb.core.adapters.abcdisplayer.URLGenerator static method) build_connectivity_measure() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) build_datatype_filters() (tvb.core.entities.filters.factory.StaticFiltersFactory static method) build_display_result() (tvb.core.adapters.abcdisplayer.ABCDisplayer method) build_float_value_wrapper() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) build_h5_url() (tvb.core.adapters.abcdisplayer.URLGenerator static method) build_int_value_wrapper() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) build_logger() (tvb.basic.logger.builder.LoggerBuilder method) build_monitor_url() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController static method) build_operations_filters() (tvb.core.entities.filters.factory.StaticFiltersFactory static method) build_params_for_selectable_connectivity() (tvb.adapters.visualizers.time_series.ABCSpaceDisplayer static method) build_params_for_subselectable_ts() (tvb.adapters.visualizers.time_series.ABCSpaceDisplayer method) build_path() (in module tvb.interfaces.rest.server.run) build_request_url() (tvb.interfaces.rest.client.main_api.MainApi method) build_url() (tvb.core.adapters.abcdisplayer.URLGenerator static method) BURST_CANCELED (tvb.core.entities.model.model_burst.BurstConfiguration attribute) BURST_ERROR (tvb.core.entities.model.model_burst.BurstConfiguration attribute) BURST_FINISHED (tvb.core.entities.model.model_burst.BurstConfiguration attribute) BURST_HELP_PAGE (tvb.interfaces.web.controllers.help.help_config.HelpConfig attribute) burst_preview() (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapter method) BURST_RUNNING (tvb.core.entities.model.model_burst.BurstConfiguration attribute) BurstBaseController (class in tvb.interfaces.web.controllers.burst.base_controller) BurstConfiguration (class in tvb.core.entities.model.model_burst) BurstConfigurationH5 (class in tvb.core.entities.file.simulator.burst_configuration_h5) BurstDAO (class in tvb.core.entities.storage.burst_dao) BurstService (class in tvb.core.services.burst_service) BurstServiceException BytesField (class in tvb.core.neotraits.forms)

C

C (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) c (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) (tvb.contrib.simulator.models.hindmarsh_rose.HindmarshRose attribute) (tvb.contrib.simulator.models.larter.Larter attribute) C (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.contrib.simulator.models.morris_lecar.MorrisLecar attribute) c (tvb.contrib.simulator.models.wong_wang.WongWang attribute) (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute) C (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) c (tvb.simulator.models.oscillator.Generic2dOscillator attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) c_e (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) c_ee (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) c_ei (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) c_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) c_ie (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) c_ii (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) C_ik (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) cached_trait_property() (in module tvb.basic.neotraits._core) (in module tvb.basic.neotraits.api) CachedTraitProperty (class in tvb.basic.neotraits._core) calc_fft() (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) calc_phase_plane() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) CalculusConfig (class in tvb.contrib.scripts.utils.data_structures_utils) calls (tvb.simulator.simulator.Simulator attribute) calpha (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) can_be_active() (tvb.adapters.analyzers.bct_adapters.BaseBCT static method) (tvb.core.adapters.abcadapter.ABCAdapter static method) CAN_RUN_HPC (tvb.basic.config.settings.HPCSettings attribute) cancel_or_remove_burst() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) cancel_or_remove_operation() (tvb.interfaces.web.controllers.flow_controller.FlowController method) (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) Case (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) CaseDAO (class in tvb.core.entities.storage.project_dao) cases (tvb.dsl.NeuroML.lems.model.dynamics.ConditionalDerivedVariable attribute) (tvb.dsl_cuda.lems.model.dynamics.ConditionalDerivedVariable attribute) category_name (tvb.config.algorithm_categories.AlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.AnalyzeAlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.CreateAlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.SimulateAlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.UploadAlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.ViewAlgorithmCategoryConfig attribute) cbeta (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) center() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) (tvb.datatypes.surfaces.Surface method) center_vertices() (in module tvb.datatypes.surfaces) centers (tvb.contrib.scripts.datatypes.connectivity.Connectivity attribute) CentralityEdgeBinary (class in tvb.adapters.analyzers.bct_centrality_adapters) CentralityEdgeWeighted (class in tvb.adapters.analyzers.bct_centrality_adapters) CentralityEigenVector (class in tvb.adapters.analyzers.bct_centrality_adapters) CentralityKCoreness (class in tvb.adapters.analyzers.bct_centrality_adapters) CentralityKCorenessBD (class in tvb.adapters.analyzers.bct_centrality_adapters) CentralityNodeBinary (class in tvb.adapters.analyzers.bct_centrality_adapters) CentralityNodeWeighted (class in tvb.adapters.analyzers.bct_centrality_adapters) CentralityShortcuts (class in tvb.adapters.analyzers.bct_centrality_adapters) centres (tvb.datatypes.connectivity.Connectivity attribute) centres_annular() (tvb.datatypes.connectivity.Connectivity method) centres_cubic() (tvb.datatypes.connectivity.Connectivity method) centres_spherical() (tvb.datatypes.connectivity.Connectivity method) CENTRES_TOKEN (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporter attribute) CENTRES_TOKEN2 (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporter attribute) centres_toroidal() (tvb.datatypes.connectivity.Connectivity method) Cext (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) cgamma (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) chained_validators (tvb.interfaces.web.controllers.project.figure_controller.EditPreview attribute) (tvb.interfaces.web.controllers.project.project_controller.EditForm attribute) (tvb.interfaces.web.controllers.settings_controller.SettingsForm attribute) (tvb.interfaces.web.controllers.users_controller.EditUserForm attribute) (tvb.interfaces.web.controllers.users_controller.KeycloakLoginForm attribute) (tvb.interfaces.web.controllers.users_controller.LoginForm attribute) (tvb.interfaces.web.controllers.users_controller.RecoveryForm attribute) (tvb.interfaces.web.controllers.users_controller.RegisterForm attribute) change_algorithm() (in module tvb.core.entities.model.db_update_scripts.helper) change_filename_or_overwrite() (in module tvb.contrib.scripts.utils.file_utils) change_filename_or_overwrite_with_wildcard() (in module tvb.contrib.scripts.utils.file_utils) channel_inds (tvb.contrib.scripts.datatypes.sensors.SensorsInternal attribute) channel_labels (tvb.contrib.scripts.datatypes.sensors.SensorsInternal attribute) check_admin() (in module tvb.interfaces.web.controllers.decorators) check_created() (tvb.core.entities.file.files_helper.FilesHelper method) check_db_url() (tvb.core.services.settings_service.SettingsService method) (tvb.interfaces.web.controllers.settings_controller.SettingsController method) check_kc_user() (in module tvb.interfaces.web.controllers.decorators) check_login() (tvb.core.services.user_service.UserService static method) check_operations_job() (tvb.core.services.hpc_operation_service.HPCOperationService static method) check_project_permission() (tvb.interfaces.rest.server.access_permissions.permissions.ProjectAccessPermission method) check_results() (tvb.dsl_cuda.run.__main__.TVB_test method) check_sso() (tvb.interfaces.web.controllers.users_controller.UserController method) check_upload_size() (tvb.interfaces.web.request_handler.RequestHandler static method) check_user() (in module tvb.interfaces.web.controllers.decorators) checked (tvb.core.neotraits.forms.Option attribute) child_components (tvb.dsl.NeuroML.lems.model.component.FatComponent attribute) (tvb.dsl_cuda.lems.model.component.FatComponent attribute) child_instances (tvb.dsl.NeuroML.lems.model.structure.Structure attribute) (tvb.dsl_cuda.lems.model.structure.Structure attribute) ChildInstance (class in tvb.dsl.NeuroML.lems.model.structure) (class in tvb.dsl_cuda.lems.model.structure) Children (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) children (tvb.dsl.NeuroML.lems.model.component.Component attribute) (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Component attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) chisquare() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) choice() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) choices (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorForm attribute) (tvb.dsl.NeuroML.lems.model.component.Exposure attribute) (tvb.dsl_cuda.lems.model.component.Exposure attribute) choices_spatial (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm attribute) choices_temporal (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm attribute) chunk_iter() (in module tvb.adapters.uploaders.tract_importer) Cik (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) clamp_state() (tvb.simulator.integrators.Integrator method) clamped_state_variable_indices (tvb.simulator.integrators.Integrator attribute) clamped_state_variable_values (tvb.simulator.integrators.Integrator attribute) classname (tvb.core.entities.model.model_operation.Algorithm attribute) clean_files_on_disk() (tvb.interfaces.web.request_handler.RequestHandler static method) clean_from_session() (tvb.interfaces.web.entities.context_selected_adapter.SelectedAdapterContext method) clean_project_data_from_session() (in module tvb.interfaces.web.controllers.common) clean_up() (tvb.dsl.NeuroML.lems.parser.expr.ValueNode method) (tvb.dsl_cuda.lems.parser.expr.ValueNode method) cleanup() (tvb.adapters.analyzers.matlab_worker.MatlabWorker method) cleanup_stacks() (tvb.dsl.NeuroML.lems.parser.expr.ExprParser method) (tvb.dsl_cuda.lems.parser.expr.ExprParser method) clear() (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) click_trajectory() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) ClientException clone() (tvb.core.entities.model.model_burst.BurstConfiguration method) (tvb.core.entities.model.model_burst.TabConfiguration method) close() (tvb.core.neotraits._h5core.H5File method) (tvb.core.neotraits.h5.H5File method) close_file() (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager method) close_session() (tvb.core.entities.storage.session_maker.SessionsStack method) close_transaction() (tvb.core.entities.storage.session_maker.SessionsStack method) CLUSTER_NODE_NAME (tvb.basic.config.settings.ClusterSettings attribute) ClusteringCoefficient (class in tvb.adapters.analyzers.bct_clustering_adapters) ClusteringCoefficientBU (class in tvb.adapters.analyzers.bct_clustering_adapters) ClusteringCoefficientWD (class in tvb.adapters.analyzers.bct_clustering_adapters) ClusteringCoefficientWU (class in tvb.adapters.analyzers.bct_clustering_adapters) ClusterSchedulerClient (class in tvb.core.services.backend_clients.cluster_scheduler_client) ClusterSettings (class in tvb.basic.config.settings) ClusterTimedRotatingFileHandler (class in tvb.config.logger.cluster_handler) Cm_e (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) Cm_i (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) cmax (tvb.simulator.coupling.Sigmoidal attribute) (tvb.simulator.coupling.SigmoidalJansenRit attribute) cmin (tvb.simulator.coupling.Sigmoidal attribute) (tvb.simulator.coupling.SigmoidalJansenRit attribute) CODE (tvb.interfaces.rest.commons.strings.FormKeyInput attribute) CODE_CHECKED_TO_VERSION (tvb.config.profile_settings.TestSQLiteProfile attribute) CODE_GID (tvb.core.entities.transient.context_overlay.CommonDetails attribute) CODE_OPERATION_GROUP_ID (tvb.core.entities.transient.context_overlay.CommonDetails attribute) CODE_OPERATION_GROUP_NAME (tvb.core.entities.transient.context_overlay.CommonDetails attribute) CODE_OPERATION_TAG (tvb.core.entities.transient.context_overlay.CommonDetails attribute) code_version (tvb.core.entities.model.model_burst.Dynamic attribute) CodeUpdateManager (class in tvb.core.code_versions.code_update_manager) coherence() (in module tvb.analyzers.node_coherence) coherence_mlab() (in module tvb.analyzers.node_coherence) CoherenceSpectrum (class in tvb.datatypes.spectral) CoherenceSpectrumH5 (class in tvb.adapters.datatypes.h5.spectral_h5) CoherenceSpectrumIndex (class in tvb.adapters.datatypes.db.spectral) color (tvb.dsl.NeuroML.lems.model.simulation.Record attribute) (tvb.dsl_cuda.lems.model.simulation.Record attribute) color_texture_to_list() (in module tvb.core.services.texture_to_json) colors (tvb.adapters.visualizers.connectivity.ConnectivityViewerModel attribute) coloured() (tvb.simulator.noise.Noise method), [1] COLW (tvb.interfaces.command.benchmark.Bench attribute) COMMAND_PROFILE (tvb.basic.profile.TvbProfile attribute) CommandSettingsProfile (class in tvb.config.profile_settings) CommonDetails (class in tvb.core.entities.transient.context_overlay) compare_with_ref() (tvb.dsl_cuda.run.__main__.TVB_test method) completion_date (tvb.core.entities.model.model_operation.Operation attribute) ComplexCoherenceSpectrum (class in tvb.datatypes.spectral) ComplexCoherenceSpectrumH5 (class in tvb.adapters.datatypes.h5.spectral_h5) ComplexCoherenceSpectrumIndex (class in tvb.adapters.datatypes.db.spectral) Component (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) component (tvb.dsl.NeuroML.lems.model.simulation.Run attribute) (tvb.dsl.NeuroML.lems.model.structure.ChildInstance attribute) (tvb.dsl.NeuroML.lems.model.structure.MultiInstantiate attribute) (tvb.dsl_cuda.lems.model.simulation.Run attribute) (tvb.dsl_cuda.lems.model.structure.ChildInstance attribute) (tvb.dsl_cuda.lems.model.structure.MultiInstantiate attribute) component_a (tvb.dsl.NeuroML.lems.model.structure.Tunnel attribute) (tvb.dsl_cuda.lems.model.structure.Tunnel attribute) component_b (tvb.dsl.NeuroML.lems.model.structure.Tunnel attribute) (tvb.dsl_cuda.lems.model.structure.Tunnel attribute) component_references (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) component_requirements (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) component_time_series (tvb.datatypes.mode_decompositions.IndependentComponents attribute) (tvb.datatypes.mode_decompositions.PrincipalComponents attribute) component_type (tvb.dsl.NeuroML.lems.model.structure.MultiInstantiate attribute) (tvb.dsl_cuda.lems.model.structure.MultiInstantiate attribute) component_types (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) ComponentReference (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) ComponentRequirement (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) components (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) ComponentType (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) compute() (tvb.datatypes.local_connectivity.LocalConnectivity method) compute_2d_view() (tvb.adapters.visualizers.matrix_viewer.ABCMappedArraySVGVisualizer method) compute_amplitude() (tvb.datatypes.spectral.FourierSpectrum method) (tvb.datatypes.spectral.WaveletCoefficients method) compute_available_disk_space() (tvb.core.services.backend_clients.hpc_scheduler_client.HPCSchedulerClient static method) compute_average_power() (tvb.datatypes.spectral.FourierSpectrum method) compute_bursts_disk_size() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) compute_component_time_series() (tvb.datatypes.mode_decompositions.IndependentComponents method) (tvb.datatypes.mode_decompositions.PrincipalComponents method) compute_data_for_gradient_view() (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController method) compute_derived_parameters() (tvb.analyzers.fmri_balloon.BalloonModel method) compute_disk_size_for_started_ops() (tvb.core.entities.storage.operation_dao.OperationDAO method) compute_equation() (tvb.datatypes.surfaces.Surface method) compute_gain_matrix() (in module tvb.contrib.scripts.utils.computations_utils) compute_geodesic_distance_matrix() (tvb.datatypes.surfaces.Surface method) compute_hrf() (tvb.simulator.monitors.Bold method) compute_in_degree() (in module tvb.contrib.scripts.utils.computations_utils) compute_local_connectivity() (tvb.datatypes.cortex.Cortex method) compute_mixing_matrix() (tvb.datatypes.mode_decompositions.IndependentComponents method) compute_norm_source() (tvb.datatypes.mode_decompositions.IndependentComponents method) (tvb.datatypes.mode_decompositions.PrincipalComponents method) compute_normalised_average_power() (tvb.datatypes.spectral.FourierSpectrum method) compute_normalised_component_time_series() (tvb.datatypes.mode_decompositions.IndependentComponents method) (tvb.datatypes.mode_decompositions.PrincipalComponents method) compute_operation_name() (tvb.core.entities.transient.context_overlay.CommonDetails static method) compute_parameters() (tvb.adapters.visualizers.brain.BrainViewer method) (tvb.adapters.visualizers.connectivity.Connectivity2DViewer method) (tvb.adapters.visualizers.connectivity.Connectivity3DViewer static method) (tvb.adapters.visualizers.eeg_monitor.EegMonitor method) compute_params() (tvb.adapters.visualizers.matrix_viewer.ABCMappedArraySVGVisualizer method) compute_phase() (tvb.datatypes.spectral.FourierSpectrum method) (tvb.datatypes.spectral.WaveletCoefficients method) compute_phase_plane() (tvb.adapters.visualizers.phase_plane_interactive.PhaseLineD3 method) (tvb.adapters.visualizers.phase_plane_interactive.PhasePlaneD3 method) compute_power() (tvb.datatypes.spectral.FourierSpectrum method) (tvb.datatypes.spectral.WaveletCoefficients method) compute_preview_parameters() (tvb.adapters.visualizers.connectivity.Connectivity2DViewer method) compute_raw_matrix_params() (tvb.adapters.visualizers.matrix_viewer.ABCMappedArraySVGVisualizer static method)

compute_region_labels() (tvb.datatypes.connectivity.Connectivity method) compute_required_info() (tvb.adapters.visualizers.eeg_monitor.EegMonitor method) compute_search_indices() (tvb.contrib.scripts.datatypes.lookup_tables.LookUpTable method) compute_size_on_disk() (tvb.core.entities.file.files_helper.FilesHelper static method) compute_sparse_matrix() (tvb.datatypes.local_connectivity.LocalConnectivity method) compute_spikes_counts() (in module tvb.contrib.scripts.utils.computations_utils) compute_surface_area() (tvb.contrib.scripts.datatypes.surface.Surface method) compute_topography_data() (tvb.adapters.visualizers.topographic.TopographyCalculations static method) compute_topological_constants() (tvb.datatypes.surfaces.Surface method) compute_tract_lengths() (tvb.datatypes.connectivity.Connectivity method) compute_triangle_normals() (tvb.datatypes.surfaces.Surface method) compute_url() (tvb.interfaces.rest.commons.strings.RestLink method) compute_user_generated_disk_size() (tvb.core.entities.storage.project_dao.CaseDAO method) (tvb.core.services.user_service.UserService static method) compute_vertex_normals() (tvb.datatypes.surfaces.Surface method) concatenate_heterogeneous_DataArrays() (in module tvb.contrib.scripts.utils.data_structures_utils) condition (tvb.dsl.NeuroML.lems.model.dynamics.Case attribute) (tvb.dsl.NeuroML.lems.model.dynamics.ConditionalDerivedVariable attribute) (tvb.dsl_cuda.lems.model.dynamics.Case attribute) (tvb.dsl_cuda.lems.model.dynamics.ConditionalDerivedVariable attribute) condition_expression_tree (tvb.dsl.NeuroML.lems.model.dynamics.Case attribute) (tvb.dsl_cuda.lems.model.dynamics.Case attribute) conditional_derived_variables (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral attribute) (tvb.dsl_cuda.lems.model.dynamics.Behavioral attribute) ConditionalDerivedVariable (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) conductances (tvb.datatypes.projections.ProjectionMatrix attribute) conduction_speed (tvb.simulator.simulator.Simulator attribute) config_for_sim() (tvb.simulator.monitors.Bold method) (tvb.simulator.monitors.BoldRegionROI method) (tvb.simulator.monitors.EEG method) (tvb.simulator.monitors.Monitor method) (tvb.simulator.monitors.ProgressLogger method) (tvb.simulator.monitors.Projection method) (tvb.simulator.monitors.Raw method) (tvb.simulator.monitors.SpatialAverage method) (tvb.simulator.monitors.TemporalAverage method) configure() (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapter method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapter method) (tvb.adapters.analyzers.fcd_adapter.FunctionalConnectivityDynamicsAdapter method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapter method) (tvb.adapters.analyzers.fourier_adapter.FourierAdapter method) (tvb.adapters.analyzers.ica_adapter.ICAAdapter method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapter method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceAdapter method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceAdapter method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapter method) (tvb.adapters.analyzers.pca_adapter.PCAAdapter method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapter method) (tvb.adapters.simulator.hpc_simulator_adapter.HPCTimeseriesMetricsAdapter method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter method) (tvb.basic.neotraits._core.HasTraits method) (tvb.basic.neotraits.api.HasTraits method) (tvb.contrib.scripts.datatypes.head.Head method) (tvb.contrib.scripts.datatypes.lookup_tables.LookUpTable method) (tvb.contrib.scripts.datatypes.sensors.Sensors method) (tvb.contrib.scripts.datatypes.sensors.SensorsInternal method) (tvb.contrib.scripts.datatypes.surface.Surface method) (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series.TimeSeriesEEG method) (tvb.contrib.scripts.datatypes.time_series.TimeSeriesMEG method) (tvb.contrib.scripts.datatypes.time_series.TimeSeriesSEEG method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeriesRegion method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeriesSensors method) (tvb.contrib.simulator.models.brunel_wang.BrunelWang method) (tvb.contrib.simulator.models.wong_wang.WongWang method) (tvb.core.adapters.abcadapter.ABCAdapter method) (tvb.datatypes.connectivity.Connectivity method) (tvb.datatypes.cortex.Cortex method) (tvb.datatypes.sensors.Sensors method) (tvb.datatypes.spectral.FourierSpectrum method) (tvb.datatypes.surfaces.Surface method) (tvb.simulator.coupling.PreSigmoidal method) (tvb.simulator.models.base.Model method) (tvb.simulator.models.hopfield.Hopfield method), [1] (tvb.simulator.models.stefanescu_jirsa.ReducedSetBase method) (tvb.simulator.models.wong_wang.ReducedWongWang method) (tvb.simulator.monitors.Projection method) (tvb.simulator.noise.Noise method) (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) (tvb.simulator.simulator.Simulator method) configure_coloured() (tvb.simulator.noise.Noise method) configure_matjax_doc() (in module tvb.interfaces.web.controllers.burst.matjax) configure_space() (tvb.datatypes.patterns.SpatialPattern method) (tvb.datatypes.patterns.StimuliRegion method) (tvb.datatypes.patterns.StimuliSurface method) configure_time() (tvb.datatypes.patterns.SpatioTemporalPattern method) configure_white() (tvb.simulator.noise.Noise method), [1] Connectivity (class in tvb.contrib.scripts.datatypes.connectivity) (class in tvb.datatypes.connectivity) connectivity (tvb.adapters.analyzers.bct_adapters.BaseBCTModel attribute) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorModel attribute) (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.h5.annotation_h5.ConnectivityAnnotations attribute) (tvb.adapters.uploaders.brco_importer.BRCOImporterModel attribute) (tvb.adapters.uploaders.connectivity_measure_importer.ConnectivityMeasureImporterModel attribute) (tvb.adapters.uploaders.nifti_importer.NIFTIImporterModel attribute) (tvb.adapters.uploaders.region_mapping_importer.RegionMappingImporterModel attribute) (tvb.adapters.visualizers.connectivity.ConnectivityViewerModel attribute) (tvb.adapters.visualizers.connectivity_edge_bundle.ConnectivityEdgeBundleModel attribute) (tvb.contrib.scripts.datatypes.head.Head attribute) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeriesRegion attribute) (tvb.core.entities.file.simulator.view_model.SimulatorAdapterModel attribute) (tvb.datatypes.graph.ConnectivityMeasure attribute) (tvb.datatypes.patterns.StimuliRegion attribute) (tvb.datatypes.region_mapping.RegionMapping attribute) (tvb.datatypes.region_mapping.RegionVolumeMapping attribute) (tvb.datatypes.time_series.TimeSeriesRegion attribute) (tvb.simulator.simulator.Simulator attribute) Connectivity2DViewer (class in tvb.adapters.visualizers.connectivity) Connectivity3DViewer (class in tvb.adapters.visualizers.connectivity) CONNECTIVITY_CLASS (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) CONNECTIVITY_FIELD (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController attribute) CONNECTIVITY_HELP_PAGE (tvb.interfaces.web.controllers.help.help_config.HelpConfig attribute) connectivity_index (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsViewModel attribute) connectivity_measure (tvb.adapters.visualizers.region_volume_mapping.ConnectivityMeasureVolumeVisualizerModel attribute) (tvb.adapters.visualizers.region_volume_mapping.RegionVolumeMappingVisualiserModel attribute) (tvb.adapters.visualizers.surface_view.BaseSurfaceViewerModel attribute) CONNECTIVITY_MODULE (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) ConnectivityAnnotations (class in tvb.adapters.datatypes.h5.annotation_h5) ConnectivityAnnotationsH5 (class in tvb.adapters.datatypes.h5.annotation_h5) ConnectivityAnnotationsIndex (class in tvb.adapters.datatypes.db.annotation) ConnectivityAnnotationsView (class in tvb.adapters.visualizers.annotations_viewer) ConnectivityAnnotationsViewForm (class in tvb.adapters.visualizers.annotations_viewer) ConnectivityAnnotationsViewModel (class in tvb.adapters.visualizers.annotations_viewer) ConnectivityCreator (class in tvb.adapters.creators.connectivity_creator) ConnectivityCreatorForm (class in tvb.adapters.creators.connectivity_creator) ConnectivityCreatorModel (class in tvb.adapters.creators.connectivity_creator) ConnectivityEdgeBundle (class in tvb.adapters.visualizers.connectivity_edge_bundle) ConnectivityEdgeBundleForm (class in tvb.adapters.visualizers.connectivity_edge_bundle) ConnectivityEdgeBundleModel (class in tvb.adapters.visualizers.connectivity_edge_bundle) ConnectivityH5 (class in tvb.adapters.datatypes.h5.connectivity_h5) ConnectivityIndex (class in tvb.adapters.datatypes.db.connectivity) ConnectivityMeasure (class in tvb.datatypes.graph) ConnectivityMeasureH5 (class in tvb.adapters.datatypes.h5.graph_h5) ConnectivityMeasureImporter (class in tvb.adapters.uploaders.connectivity_measure_importer) ConnectivityMeasureImporterForm (class in tvb.adapters.uploaders.connectivity_measure_importer) ConnectivityMeasureImporterModel (class in tvb.adapters.uploaders.connectivity_measure_importer) ConnectivityMeasureIndex (class in tvb.adapters.datatypes.db.graph) ConnectivityMeasureOnSurfaceViewer (class in tvb.adapters.visualizers.surface_view) ConnectivityMeasureOnSurfaceViewerForm (class in tvb.adapters.visualizers.surface_view) ConnectivityMeasureVolumeVisualizer (class in tvb.adapters.visualizers.region_volume_mapping) ConnectivityMeasureVolumeVisualizerForm (class in tvb.adapters.visualizers.region_volume_mapping) ConnectivityMeasureVolumeVisualizerModel (class in tvb.adapters.visualizers.region_volume_mapping) ConnectivityViewer (class in tvb.adapters.visualizers.connectivity) ConnectivityViewerForm (class in tvb.adapters.visualizers.connectivity) ConnectivityViewerModel (class in tvb.adapters.visualizers.connectivity) const_indices (tvb.simulator.history.SparseHistory attribute) Constant (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) constants (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) construct_centres() (in module tvb.adapters.creators.allen_creator) construct_import_path() (in module tvb.contrib.scripts.utils.data_structures_utils) construct_structural_conn() (in module tvb.adapters.creators.allen_creator) construct_tract_lengths() (in module tvb.adapters.creators.allen_creator) constructors (tvb.core.neotraits._h5accessors.SparseMatrix attribute) (tvb.core.neotraits.h5.SparseMatrix attribute) context_selected() (in module tvb.interfaces.web.controllers.decorators) ContinuousWaveletTransform (class in tvb.analyzers.wavelet) ContinuousWaveletTransformAdapter (class in tvb.adapters.analyzers.wavelet_adapter) ContinuousWaveletTransformAdapterForm (class in tvb.adapters.analyzers.wavelet_adapter) COOMBES_BYRNE (tvb.simulator.models.ModelsEnum attribute) COOMBES_BYRNE_2D (tvb.simulator.models.ModelsEnum attribute) coords (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries attribute) coords_to_dict() (in module tvb.contrib.scripts.datatypes.time_series_xarray) copy() (tvb.dsl.NeuroML.lems.base.base.LEMSBase method) (tvb.dsl_cuda.lems.base.base.LEMSBase method) copy_attributes() (tvb.contrib.scripts.datatypes.base.BaseModel static method) copy_file() (tvb.core.entities.file.files_helper.FilesHelper static method) copy_object_attributes() (in module tvb.contrib.scripts.utils.data_structures_utils) copy_simulator_configuration() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) copy_zip_entry_into_temp() (in module tvb.basic.readers) CorrelationCoefficient (class in tvb.adapters.analyzers.cross_correlation_adapter) CorrelationCoefficients (class in tvb.datatypes.graph) CorrelationCoefficientsH5 (class in tvb.adapters.datatypes.h5.graph_h5) CorrelationCoefficientsIndex (class in tvb.adapters.datatypes.db.graph) Cortex (class in tvb.datatypes.cortex) cortex() (tvb.contrib.scripts.datatypes.head.Head method) CortexViewModel (class in tvb.core.entities.file.simulator.view_model) cortical (tvb.datatypes.connectivity.Connectivity attribute) CORTICAL (tvb.simulator.monitors.SpatialAverage attribute) CORTICAL_INFO (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporter attribute) cortical_region_mapping (tvb.contrib.scripts.datatypes.head.Head attribute) cortical_surface (tvb.contrib.scripts.datatypes.head.Head attribute) CorticalRegionMapping (class in tvb.contrib.scripts.datatypes.region_mapping) CorticalSurface (class in tvb.contrib.scripts.datatypes.surface) (class in tvb.datatypes.surfaces) Cosine (class in tvb.datatypes.equations) CosineEquationForm (class in tvb.adapters.simulator.equation_forms) count_all_datatypes() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) count_bursts_with_name() (tvb.core.entities.storage.burst_dao.BurstDAO method) count_datatypes() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) count_datatypes_in_burst() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) count_datatypes_in_group() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) count_filtered_operations() (tvb.core.services.project_service.ProjectService static method) count_projects_for_name() (tvb.core.entities.storage.project_dao.CaseDAO method) count_resulted_datatypes() (tvb.core.entities.storage.operation_dao.OperationDAO method) count_results (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) count_users_for_name() (tvb.core.entities.storage.project_dao.CaseDAO method) Coupling (class in tvb.simulator.coupling) coupling (tvb.simulator.simulator.Simulator attribute) coupling_strength (tvb.datatypes.cortex.Cortex attribute) Covariance (class in tvb.datatypes.graph) CovarianceH5 (class in tvb.adapters.datatypes.h5.graph_h5) CovarianceIndex (class in tvb.adapters.datatypes.db.graph) create_date (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.generic_attributes.GenericAttributes attribute) (tvb.core.entities.model.model_burst.BurstConfiguration attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) (tvb.core.entities.model.model_operation.Operation attribute) (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) (tvb.core.neotraits.db.HasTraitsIndex attribute) create_eeg_ts() (tvb.adapters.uploaders.mat_timeseries_importer.RegionTimeSeriesImporter method) create_figure() (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive method) (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive method) (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractivePlotter method) create_file_order() (in module tvb.adapters.creators.allen_creator) create_link() (tvb.core.services.algorithm_service.AlgorithmService static method) create_local_connectivity() (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController method) create_new() (tvb.interfaces.web.controllers.users_controller.UserController method) create_project() (tvb.interfaces.rest.client.tvb_client.TVBClient method) (tvb.interfaces.rest.server.facades.project_facade.ProjectFacade method) CREATE_PROJECT_DESCRIPTION (tvb.interfaces.rest.commons.strings.FormKeyInput attribute) CREATE_PROJECT_NAME (tvb.interfaces.rest.commons.strings.FormKeyInput attribute) create_region_labels() (tvb.datatypes.connectivity.Connectivity method) create_region_ts() (tvb.adapters.uploaders.mat_timeseries_importer.RegionTimeSeriesImporter method) create_row_of_specs() (tvb.interfaces.web.controllers.flow_controller.FlowController method) create_stimulus() (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController method) (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController method) create_temp_folder() (in module tvb.interfaces.rest.commons.files_helper) create_time_series() (tvb.simulator.monitors.EEG method) (tvb.simulator.monitors.GlobalAverage method) (tvb.simulator.monitors.MEG method) (tvb.simulator.monitors.Monitor method) (tvb.simulator.monitors.SpatialAverage method) (tvb.simulator.monitors.iEEG method) create_user() (tvb.core.services.user_service.UserService method) CreateAlgorithmCategoryConfig (class in tvb.config.algorithm_categories) createlink() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) cross_spectrum (tvb.datatypes.spectral.ComplexCoherenceSpectrum attribute) CrossCoherenceVisualizer (class in tvb.adapters.visualizers.cross_coherence) CrossCoherenceVisualizerForm (class in tvb.adapters.visualizers.cross_coherence) CrossCoherenceVisualizerModel (class in tvb.adapters.visualizers.cross_coherence) CrossCorrelate (class in tvb.adapters.analyzers.cross_correlation_adapter) CrossCorrelateAdapter (class in tvb.adapters.analyzers.cross_correlation_adapter) CrossCorrelateAdapterForm (class in tvb.adapters.analyzers.cross_correlation_adapter) CrossCorrelateAdapterModel (class in tvb.adapters.analyzers.cross_correlation_adapter) CrossCorrelation (class in tvb.datatypes.temporal_correlations) CrossCorrelationH5 (class in tvb.adapters.datatypes.h5.temporal_correlations_h5) CrossCorrelationIndex (class in tvb.adapters.datatypes.db.temporal_correlations) CrossCorrelationVisualizer (class in tvb.adapters.visualizers.cross_correlation) CrossCorrelationVisualizerForm (class in tvb.adapters.visualizers.cross_correlation) CrossCorrelationVisualizerModel (class in tvb.adapters.visualizers.cross_correlation) CRYPT_BUFFER_SIZE (tvb.basic.config.settings.HPCSettings attribute) CRYPT_PASS_SIZE (tvb.basic.config.settings.HPCSettings attribute) CSCS_DATA_FOLDER (tvb.core.services.backend_clients.hpc_scheduler_client.HPCSchedulerClient attribute) CSCS_LOGIN_TOKEN_ENV_KEY (tvb.core.services.backend_clients.hpc_scheduler_client.HPCSchedulerClient attribute) CSVConnectivityImporter (class in tvb.adapters.uploaders.csv_connectivity_importer) CSVConnectivityImporterForm (class in tvb.adapters.uploaders.csv_connectivity_importer) CSVConnectivityImporterModel (class in tvb.adapters.uploaders.csv_connectivity_importer) CSVConnectivityParser (class in tvb.adapters.uploaders.csv_connectivity_importer) cuda_templating() (in module tvb.dsl_cuda.LEMS2CUDA) current (tvb.basic.profile.TvbProfile attribute) current_page (tvb.adapters.visualizers.eeg_monitor.EegMonitor attribute) CURRENT_PROFILE_NAME (tvb.basic.profile.TvbProfile attribute) current_session (tvb.core.entities.storage.session_maker.SessionsStack attribute) current_state (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) (tvb.simulator.history.DenseHistory attribute) current_step (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) (tvb.simulator.simulator.Simulator attribute) curve_elbow_point() (in module tvb.contrib.scripts.utils.computations_utils) custom_hook() (tvb.interfaces.rest.commons.decoders.CustomDecoder static method) CustomDecoder (class in tvb.interfaces.rest.commons.decoders) cutoff (tvb.datatypes.local_connectivity.LocalConnectivity attribute) CUTOFF_FIELD (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController attribute) cvar (tvb.simulator.models.base.Model attribute) (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute) (tvb.simulator.models.hopfield.Hopfield attribute) (tvb.simulator.models.jansen_rit.JansenRit attribute) (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.linear.Linear attribute) (tvb.simulator.models.oscillator.Generic2dOscillator attribute) (tvb.simulator.models.oscillator.Kuramoto attribute) (tvb.simulator.models.oscillator.SupHopf attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) (tvb.simulator.models.wong_wang.ReducedWongWang attribute) cvars (tvb.simulator.history.BaseHistory attribute)

D

d (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) (tvb.contrib.simulator.models.hindmarsh_rose.HindmarshRose attribute) (tvb.contrib.simulator.models.wong_wang.WongWang attribute) (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute) (tvb.simulator.models.oscillator.Generic2dOscillator attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) (tvb.simulator.models.wong_wang.ReducedWongWang attribute) d_Ca (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) d_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) d_K (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) d_Na (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) d_V (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) d_Z (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) DAO (class in tvb.core.entities.storage) data (tvb.contrib.scripts.datatypes.lookup_tables.LookUpTable attribute) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries attribute) (tvb.datatypes.time_series.TimeSeries attribute) data_0 (tvb.adapters.visualizers.topographic.TopographicViewerModel attribute) data_1 (tvb.adapters.visualizers.topographic.TopographicViewerModel attribute) data_2 (tvb.adapters.visualizers.eeg_monitor.EegMonitorModel attribute) (tvb.adapters.visualizers.topographic.TopographicViewerModel attribute) data_3 (tvb.adapters.visualizers.eeg_monitor.EegMonitorModel attribute) data_displays (tvb.dsl.NeuroML.lems.model.simulation.Simulation attribute) (tvb.dsl_cuda.lems.model.simulation.Simulation attribute) data_file (tvb.adapters.uploaders.brco_importer.BRCOImporterModel attribute) (tvb.adapters.uploaders.connectivity_measure_importer.ConnectivityMeasureImporterModel attribute) (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporterModel attribute) (tvb.adapters.uploaders.gifti_timeseries_importer.GIFTITimeSeriesImporterModel attribute) (tvb.adapters.uploaders.mat_timeseries_importer.RegionMatTimeSeriesImporterModel attribute) (tvb.adapters.uploaders.networkx_importer.NetworkxImporterModel attribute) (tvb.adapters.uploaders.nifti_importer.NIFTIImporterModel attribute) (tvb.adapters.uploaders.obj_importer.ObjSurfaceImporterModel attribute) (tvb.adapters.uploaders.tract_importer.TrackImporterModel attribute) (tvb.adapters.uploaders.tvb_importer.TVBImporterModel attribute) data_file_part2 (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporterModel attribute) DATA_IN_PROJECT (tvb.interfaces.rest.commons.strings.RestLink attribute) data_length_1d (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) data_length_2d (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) data_length_3d (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) data_length_4d (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) data_name (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.h5.mapped_value_h5.ValueWrapper attribute) data_ndim (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) data_region (tvb.dsl.NeuroML.lems.model.simulation.DataDisplay attribute) (tvb.dsl_cuda.lems.model.simulation.DataDisplay attribute) data_slice (tvb.adapters.visualizers.region_volume_mapping.VolumeVisualizerModel attribute) DATA_STATE (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails attribute) DATA_SUBJECT (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails attribute) data_subject (tvb.core.neotraits.uploader_view_model.UploaderViewModel attribute) DATA_TAG_1 (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails attribute) DATA_TAG_2 (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails attribute) DATA_TAG_3 (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails attribute) DATA_TAG_4 (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails attribute) DATA_TAG_5 (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails attribute) DATA_TITLE (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails attribute) data_type (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.h5.mapped_value_h5.ValueWrapper attribute) DATA_TYPES_PAGE_SIZE (tvb.core.entities.file.files_update_manager.FilesUpdateManager attribute) data_value (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.h5.mapped_value_h5.ValueWrapper attribute) DATA_VERSION (tvb.basic.config.settings.VersionSettings attribute) DATA_VERSION_ATTRIBUTE (tvb.basic.config.settings.VersionSettings attribute) data_writers (tvb.dsl.NeuroML.lems.model.simulation.Simulation attribute) (tvb.dsl_cuda.lems.model.simulation.Simulation attribute) data_xarray_from_continuous_events() (in module tvb.contrib.scripts.utils.data_structures_utils) DataDisplay (class in tvb.dsl.NeuroML.lems.model.simulation) (class in tvb.dsl_cuda.lems.model.simulation) DataOutput (class in tvb.dsl.NeuroML.lems.model.simulation) (class in tvb.dsl_cuda.lems.model.simulation) DataSet (class in tvb.core.neotraits._h5accessors) (class in tvb.core.neotraits.h5) dataset_name (tvb.adapters.uploaders.connectivity_measure_importer.ConnectivityMeasureImporterModel attribute) (tvb.adapters.uploaders.mat_timeseries_importer.RegionMatTimeSeriesImporterModel attribute) (tvb.adapters.uploaders.projection_matrix_importer.ProjectionMatrixImporterModel attribute) DataSetMetaData (class in tvb.core.neotraits._h5accessors) DataType (class in tvb.core.entities.model.model_datatype) datatype (tvb.adapters.uploaders.mat_timeseries_eeg_importer.EEGMatTimeSeriesImporterModel attribute) (tvb.adapters.uploaders.mat_timeseries_importer.RegionMatTimeSeriesImporterModel attribute) (tvb.adapters.visualizers.cross_coherence.CrossCoherenceVisualizerModel attribute) (tvb.adapters.visualizers.cross_correlation.CrossCorrelationVisualizerModel attribute) (tvb.adapters.visualizers.ica.ICAModel attribute) (tvb.adapters.visualizers.matrix_viewer.MatrixVisualizerModel attribute) (tvb.adapters.visualizers.pearson_cross_correlation.PearsonCorrelationCoefficientVisualizerModel attribute) (tvb.core.entities.filters.chain.FilterChain attribute) DATATYPE_ATTRIBUTE (tvb.core.adapters.abcdisplayer.URLGenerator attribute) datatype_details() (in module tvb.interfaces.command.lab) DATATYPE_EXTRA_INFO (tvb.interfaces.rest.commons.strings.RestLink attribute) datatype_filter (tvb.core.entities.model.model_operation.Algorithm attribute) DATATYPE_GID (tvb.interfaces.rest.commons.strings.LinkPlaceholder attribute) datatype_group (tvb.adapters.visualizers.pse_discrete.DiscretePSEAdapterModel attribute) (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapterModel attribute) DATATYPE_OPERATIONS (tvb.interfaces.rest.commons.strings.RestLink attribute) datatype_replacement (tvb.core.entities.filters.chain.FilterChain attribute) DataTypeAccessPermission (class in tvb.interfaces.rest.server.access_permissions.permissions) DatatypeDAO (class in tvb.core.entities.storage.datatype_dao) DataTypeDto (class in tvb.interfaces.rest.commons.dtos) DatatypeFacade (class in tvb.interfaces.rest.server.facades.datatype_facade) DataTypeGidAttr (class in tvb.core.neotraits.view_model) DataTypeGroup (class in tvb.core.entities.model.model_datatype) DataTypeMatrix (class in tvb.core.entities.model.model_datatype) DataTypeMatrixH5 (class in tvb.adapters.datatypes.h5.spectral_h5) DatatypeMeasure (class in tvb.core.entities.file.simulator.datatype_measure_h5) DatatypeMeasureH5 (class in tvb.core.entities.file.simulator.datatype_measure_h5) DatatypeMeasureIndex (class in tvb.adapters.datatypes.db.mapped_value) DataTypeMetaData (class in tvb.core.entities.transient.structure_entities) DataTypeOverlayDetails (class in tvb.core.entities.transient.context_overlay) DATATYPES (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) (tvb.interfaces.rest.commons.strings.RestNamespace attribute) datatypes_number (tvb.core.entities.model.model_burst.BurstConfiguration attribute) DataWriter (class in tvb.dsl.NeuroML.lems.model.simulation) (class in tvb.dsl_cuda.lems.model.simulation) date2string() (in module tvb.core.utils) DATE_ATTR (tvb.adapters.uploaders.gifti.parser.GIFTIParser attribute) DATE_TIME_FORMAT (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager attribute) DATETIME_VALUE_PREFIX (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager attribute) DB_STRUCTURE_VERSION (tvb.basic.config.settings.VersionSettings attribute) DBSettings (class in tvb.basic.config.settings) debug (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl.NeuroML.lems.parser.expr.ExprParser attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.parser.expr.ExprParser attribute) decimate_time() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) declarative_attrs (tvb.basic.neotraits._declarative_base.MetaType attribute) declarative_count (tvb.interfaces.web.controllers.project.figure_controller.EditPreview attribute) (tvb.interfaces.web.controllers.project.project_controller.EditForm attribute) (tvb.interfaces.web.controllers.settings_controller.AsciiValidator attribute) (tvb.interfaces.web.controllers.settings_controller.DiskSpaceValidator attribute) (tvb.interfaces.web.controllers.settings_controller.MatlabValidator attribute) (tvb.interfaces.web.controllers.settings_controller.PortValidator attribute) (tvb.interfaces.web.controllers.settings_controller.SettingsForm attribute) (tvb.interfaces.web.controllers.settings_controller.SurfaceVerticesNrValidator attribute) (tvb.interfaces.web.controllers.settings_controller.ThreadNrValidator attribute) (tvb.interfaces.web.controllers.users_controller.EditUserForm attribute) (tvb.interfaces.web.controllers.users_controller.KeycloakLoginForm attribute) (tvb.interfaces.web.controllers.users_controller.LoginForm attribute) (tvb.interfaces.web.controllers.users_controller.RecoveryForm attribute) (tvb.interfaces.web.controllers.users_controller.RegisterForm attribute) (tvb.interfaces.web.controllers.users_controller.UniqueUsername attribute) declarative_props (tvb.basic.neotraits._declarative_base.MetaType attribute) decrypt_files_to_dir() (tvb.core.services.encryption_handler.EncryptionHandler method) decrypt_results_to_dir() (tvb.core.services.encryption_handler.EncryptionHandler method) default (tvb.dsl.NeuroML.lems.model.component.Constant attribute) (tvb.dsl.NeuroML.lems.model.component.Exposure attribute) (tvb.dsl.NeuroML.lems.model.dynamics.StateVariable attribute) (tvb.dsl_cuda.lems.model.component.Constant attribute) (tvb.dsl_cuda.lems.model.component.Exposure attribute) (tvb.dsl_cuda.lems.model.dynamics.StateVariable attribute) default() (tvb.core.neotraits._h5accessors.JsonFinal.StateVariablesEncoder method) (tvb.core.utils.TVBJSONEncoder method) (tvb.interfaces.web.controllers.flow_controller.FlowController method) DEFAULT_ADMIN_EMAIL (tvb.basic.config.settings.WebAdminSettings attribute) DEFAULT_COLOR (tvb.adapters.visualizers.connectivity.Connectivity2DViewer attribute) DEFAULT_COPY_PREFIX (tvb.interfaces.web.controllers.simulator_controller.SimulatorController attribute) default_equation (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersForm attribute) default_lems_folder() (in module tvb.dsl.LEMS2python) (in module tvb.dsl_cuda.LEMS2CUDA) default_mask (tvb.simulator.monitors.SpatialAverage attribute) default_spatial (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm attribute) DEFAULT_STORAGE (tvb.basic.config.profile_settings.BaseSettingsProfile attribute) (tvb.config.profile_settings.TestSQLiteProfile attribute) DEFAULT_SUBJECT (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) default_template() (in module tvb.dsl.LEMS2python) (in module tvb.dsl_cuda.LEMS2CUDA) default_temporal (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorForm attribute) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm attribute) default_value (tvb.dsl.NeuroML.lems.model.component.Property attribute) (tvb.dsl_cuda.lems.model.component.Property attribute) defaultdatastate (tvb.config.algorithm_categories.AlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.CreateAlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.UploadAlgorithmCategoryConfig attribute) (tvb.core.entities.model.model_operation.AlgorithmCategory attribute) Degree (class in tvb.adapters.analyzers.bct_degree_adapters) DegreeIOD (class in tvb.adapters.analyzers.bct_degree_adapters) delayed_state (tvb.simulator.history.DenseHistory attribute) delays (tvb.datatypes.connectivity.Connectivity attribute) (tvb.simulator.history.BaseHistory attribute) delete_all_files_in_folder() (in module tvb.contrib.scripts.utils.file_utils) delete_folder_safely() (in module tvb.contrib.scripts.utils.file_utils) delete_list_items_by_indices() (in module tvb.contrib.scripts.utils.data_structures_utils) delete_list_items_by_values() (in module tvb.contrib.scripts.utils.data_structures_utils) delete_members_for_project() (tvb.core.entities.storage.project_dao.CaseDAO method) delete_project() (tvb.core.entities.storage.project_dao.CaseDAO method)

delete_user() (tvb.core.services.user_service.UserService method) DenseHistory (class in tvb.simulator.history) DensityDirected (class in tvb.adapters.analyzers.bct_degree_adapters) DensityUndirected (class in tvb.adapters.analyzers.bct_degree_adapters) depth (tvb.dsl.NeuroML.lems.parser.expr.ExprParser attribute) (tvb.dsl_cuda.lems.parser.expr.ExprParser attribute) derived_parameters (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) derived_variables (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral attribute) (tvb.dsl_cuda.lems.model.dynamics.Behavioral attribute) DerivedParameter (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) DerivedVariable (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) description (tvb.core.entities.model.model_operation.Algorithm attribute) (tvb.core.entities.model.model_project.Project attribute) (tvb.dsl.NeuroML.lems.model.component.Attachments attribute) (tvb.dsl.NeuroML.lems.model.component.ComponentRequirement attribute) (tvb.dsl.NeuroML.lems.model.component.ComponentType attribute) (tvb.dsl.NeuroML.lems.model.component.Constant attribute) (tvb.dsl.NeuroML.lems.model.component.DerivedParameter attribute) (tvb.dsl.NeuroML.lems.model.component.EventPort attribute) (tvb.dsl.NeuroML.lems.model.component.Exposure attribute) (tvb.dsl.NeuroML.lems.model.component.Function attribute) (tvb.dsl.NeuroML.lems.model.component.IndexParameter attribute) (tvb.dsl.NeuroML.lems.model.component.InstanceRequirement attribute) (tvb.dsl.NeuroML.lems.model.component.Link attribute) (tvb.dsl.NeuroML.lems.model.component.Parameter attribute) (tvb.dsl.NeuroML.lems.model.component.Path attribute) (tvb.dsl.NeuroML.lems.model.component.Property attribute) (tvb.dsl.NeuroML.lems.model.component.Requirement attribute) (tvb.dsl.NeuroML.lems.model.component.Text attribute) (tvb.dsl.NeuroML.lems.model.fundamental.Dimension attribute) (tvb.dsl.NeuroML.lems.model.fundamental.Unit attribute) (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.component.Attachments attribute) (tvb.dsl_cuda.lems.model.component.ComponentRequirement attribute) (tvb.dsl_cuda.lems.model.component.ComponentType attribute) (tvb.dsl_cuda.lems.model.component.Constant attribute) (tvb.dsl_cuda.lems.model.component.DerivedParameter attribute) (tvb.dsl_cuda.lems.model.component.EventPort attribute) (tvb.dsl_cuda.lems.model.component.Exposure attribute) (tvb.dsl_cuda.lems.model.component.Function attribute) (tvb.dsl_cuda.lems.model.component.IndexParameter attribute) (tvb.dsl_cuda.lems.model.component.InstanceRequirement attribute) (tvb.dsl_cuda.lems.model.component.Link attribute) (tvb.dsl_cuda.lems.model.component.Parameter attribute) (tvb.dsl_cuda.lems.model.component.Path attribute) (tvb.dsl_cuda.lems.model.component.Property attribute) (tvb.dsl_cuda.lems.model.component.Requirement attribute) (tvb.dsl_cuda.lems.model.component.Text attribute) (tvb.dsl_cuda.lems.model.fundamental.Dimension attribute) (tvb.dsl_cuda.lems.model.fundamental.Unit attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) (tvb.interfaces.rest.commons.dtos.OperationDto attribute) DESCRIPTION_ATTR (tvb.adapters.uploaders.gifti.parser.GIFTIParser attribute) determine_adapter_class() (tvb.core.adapters.abcadapter.ABCAdapter static method) determine_datatype_from_file() (tvb.core.neotraits._h5core.H5File method) (tvb.core.neotraits.h5.H5File method) determine_default_metrics() (tvb.adapters.visualizers.pse.PSEDiscreteGroupModel method) determine_filepath() (in module tvb.core.neocom.h5) determine_indexes_for_chosen_vars_of_interest() (tvb.adapters.simulator.monitor_forms.MonitorForm static method) determine_operation_result() (tvb.adapters.visualizers.pse.PSEModel method) determine_projection_type() (in module tvb.adapters.uploaders.projection_matrix_importer) determine_type() (tvb.core.neotraits._h5core.H5File static method) (tvb.core.neotraits.h5.H5File static method) detrend (tvb.analyzers.fft.FFT attribute) detrend_ts (tvb.analyzers.node_complex_coherence.NodeComplexCoherence attribute) df (tvb.contrib.scripts.datatypes.lookup_tables.LookUpTable attribute) dfun() (tvb.contrib.simulator.models.brunel_wang.BrunelWang method) (tvb.contrib.simulator.models.epileptor.HMJEpileptor method), [1] (tvb.contrib.simulator.models.generic_2d_oscillator.Generic2dOscillator method), [1] (tvb.contrib.simulator.models.hindmarsh_rose.HindmarshRose method), [1] (tvb.contrib.simulator.models.jansen_rit_david.JansenRitDavid method) (tvb.contrib.simulator.models.larter.Larter method), [1] (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear method) (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss method) (tvb.contrib.simulator.models.morris_lecar.MorrisLecar method), [1] (tvb.contrib.simulator.models.wong_wang.WongWang method) (tvb.simulator.models.base.Model method) (tvb.simulator.models.epileptor.Epileptor method) (tvb.simulator.models.epileptor.Epileptor2D method) (tvb.simulator.models.hopfield.Hopfield method) (tvb.simulator.models.jansen_rit.JansenRit method) (tvb.simulator.models.jansen_rit.ZetterbergJansen method) (tvb.simulator.models.larter_breakspear.LarterBreakspear method) (tvb.simulator.models.linear.Linear method) (tvb.simulator.models.oscillator.Generic2dOscillator method), [1] (tvb.simulator.models.oscillator.Kuramoto method) (tvb.simulator.models.oscillator.SupHopf method) (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo method) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose method) (tvb.simulator.models.wilson_cowan.WilsonCowan method) (tvb.simulator.models.wong_wang.ReducedWongWang method) dfunDyn() (tvb.simulator.models.hopfield.Hopfield method) dict_array() (tvb.core.neotraits._h5accessors.JsonFinal.StateVariablesDecoder method) dict_str() (in module tvb.contrib.scripts.utils.data_structures_utils) dict_to_list_or_tuple() (in module tvb.contrib.scripts.utils.data_structures_utils) dictionary_builder() (in module tvb.adapters.creators.allen_creator) dicts_of_lists() (in module tvb.contrib.scripts.utils.data_structures_utils) dicts_of_lists_to_lists_of_dicts() (in module tvb.contrib.scripts.utils.data_structures_utils) Difference (class in tvb.simulator.coupling) DifferenceCouplingForm (class in tvb.adapters.simulator.coupling_forms) Dim (class in tvb.basic.neotraits._attr) (class in tvb.basic.neotraits.api) (class in tvb.simulator.descriptors) Dimension (class in tvb.dsl.NeuroML.lems.model.fundamental) (class in tvb.dsl_cuda.lems.model.fundamental) dimension (tvb.dsl.NeuroML.lems.model.component.DerivedParameter attribute) (tvb.dsl.NeuroML.lems.model.component.Function attribute) (tvb.dsl.NeuroML.lems.model.component.Parameter attribute) (tvb.dsl.NeuroML.lems.model.component.Property attribute) (tvb.dsl.NeuroML.lems.model.component.Requirement attribute) (tvb.dsl.NeuroML.lems.model.dynamics.DerivedVariable attribute) (tvb.dsl.NeuroML.lems.model.fundamental.Unit attribute) (tvb.dsl_cuda.lems.model.component.Function attribute) (tvb.dsl_cuda.lems.model.component.Parameter attribute) (tvb.dsl_cuda.lems.model.component.Property attribute) (tvb.dsl_cuda.lems.model.component.Requirement attribute) (tvb.dsl_cuda.lems.model.dynamics.DerivedVariable attribute) (tvb.dsl_cuda.lems.model.fundamental.Unit attribute) dimensions (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) dims (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries attribute) direction (tvb.dsl.NeuroML.lems.model.component.EventPort attribute) (tvb.dsl_cuda.lems.model.component.EventPort attribute) dirichlet() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) DirLoader (class in tvb.core.neocom._h5loader) disable_fields (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) DISCRETE_PSE_ADAPTER_CLASS (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) DISCRETE_PSE_ADAPTER_MODULE (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) DiscreteEquation (class in tvb.datatypes.equations) DiscretePSE (class in tvb.adapters.visualizers.pse) DiscretePSEAdapter (class in tvb.adapters.visualizers.pse_discrete) DiscretePSEAdapterForm (class in tvb.adapters.visualizers.pse_discrete) DiscretePSEAdapterModel (class in tvb.adapters.visualizers.pse_discrete) disk_size (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) DiskSpaceValidator (class in tvb.interfaces.web.controllers.settings_controller) display (tvb.config.algorithm_categories.AlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.ViewAlgorithmCategoryConfig attribute) (tvb.core.entities.model.model_operation.AlgorithmCategory attribute) display_connectivity() (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController static method) display_full_errors() (tvb.interfaces.web.controllers.common.InvalidFormValues method) display_name (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreatorModel attribute) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorModel attribute) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorModel attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_project.User attribute) DISPLAY_NAME_FIELD (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController attribute) (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController attribute) (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController attribute) display_surface() (tvb.interfaces.web.controllers.spatial.base_spatio_temporal_controller.SpatioTemporalController static method) display_type (tvb.core.entities.model.model_datatype.DataType attribute) displayname (tvb.core.entities.model.model_operation.Algorithm attribute) (tvb.core.entities.model.model_operation.AlgorithmCategory attribute) (tvb.interfaces.rest.commons.dtos.OperationDto attribute) displayresultfigures() (tvb.interfaces.web.controllers.project.figure_controller.FigureController method) displayzoomedimage() (tvb.interfaces.web.controllers.project.figure_controller.FigureController method) distance_inv() (in module tvb.analyzers.graph) DistanceDBIN (class in tvb.adapters.analyzers.bct_adapters) DistanceDWEI (class in tvb.adapters.analyzers.bct_adapters) DistanceNETW (class in tvb.adapters.analyzers.bct_adapters) DistanceRDA (class in tvb.adapters.analyzers.bct_adapters) DistanceRDM (class in tvb.adapters.analyzers.bct_adapters) do_operation_launch() (in module tvb.core.operation_async_launcher) (in module tvb.core.operation_hpc_launcher) do_step() (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController method) (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController method) domain (tvb.dsl.NeuroML.lems.model.component.Constant attribute) (tvb.dsl_cuda.lems.model.component.Constant attribute) Dop853 (class in tvb.simulator.integrators) Dop853IntegratorForm (class in tvb.adapters.simulator.integrator_forms) Dop853Stochastic (class in tvb.simulator.integrators) Dop853StochasticIntegratorForm (class in tvb.adapters.simulator.integrator_forms) Dop853StochasticViewModel (class in tvb.core.entities.file.simulator.view_model) Dop853ViewModel (class in tvb.core.entities.file.simulator.view_model) Dopri5 (class in tvb.simulator.integrators) Dopri5IntegratorForm (class in tvb.adapters.simulator.integrator_forms) Dopri5Stochastic (class in tvb.simulator.integrators) Dopri5StochasticIntegratorForm (class in tvb.adapters.simulator.integrator_forms) Dopri5StochasticViewModel (class in tvb.core.entities.file.simulator.view_model) Dopri5ViewModel (class in tvb.core.entities.file.simulator.view_model) DoubleExponential (class in tvb.datatypes.equations) DoubleExponentialEquationForm (class in tvb.adapters.simulator.equation_forms) DoubleGaussian (class in tvb.datatypes.equations) DoubleGaussianEquationForm (class in tvb.adapters.simulator.equation_forms) downgrade() (in module tvb.core.entities.model.db_update_scripts.001_update_db) (in module tvb.core.entities.model.db_update_scripts.003_update_db) (in module tvb.core.entities.model.db_update_scripts.005_update_db) (in module tvb.core.entities.model.db_update_scripts.006_update_db) (in module tvb.core.entities.model.db_update_scripts.016_update_db) (in module tvb.core.entities.model.db_update_scripts.018_update_db) download_an_construct_matrix() (in module tvb.adapters.creators.allen_creator) downloaddata() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) downloadimage() (tvb.interfaces.web.controllers.project.figure_controller.FigureController method) downloadproject() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) draw_discrete_exploration() (tvb.interfaces.web.controllers.burst.exploration_controller.ParameterExplorationController method) draw_isocline_exploration() (tvb.interfaces.web.controllers.burst.exploration_controller.ParameterExplorationController method) dt (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapterModel attribute) (tvb.analyzers.fmri_balloon.BalloonModel attribute) (tvb.simulator.integrators.Integrator attribute) (tvb.simulator.monitors.Monitor attribute) dtype (tvb.simulator.descriptors.NDArray attribute) DualBrainViewer (class in tvb.adapters.visualizers.brain) DualBrainViewerForm (class in tvb.adapters.visualizers.brain) DualBrainViewerModel (class in tvb.adapters.visualizers.brain) DUMONT_GUTKIN (tvb.simulator.models.ModelsEnum attribute) dump_with_precision() (tvb.core.adapters.abcdisplayer.ABCDisplayer static method) duplicate() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) (tvb.datatypes.time_series.TimeSeries method) duration (tvb.contrib.scripts.datatypes.time_series.TimeSeries attribute) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries attribute) dx (tvb.contrib.scripts.datatypes.lookup_tables.LookUpTable attribute) Dynamic (class in tvb.core.entities.model.model_burst) (class in tvb.interfaces.web.controllers.burst.dynamic_model_controller) dynamic (tvb.simulator.coupling.PreSigmoidal attribute) (tvb.simulator.models.hopfield.Hopfield attribute) dynamic_detail() (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController method) dynamic_ids (tvb.core.entities.model.model_burst.BurstConfiguration attribute) DynamicModelController (class in tvb.interfaces.web.controllers.burst.dynamic_model_controller) Dynamics (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) dynamics (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute)

E

e (tvb.simulator.models.oscillator.Generic2dOscillator attribute) E0 (tvb.analyzers.fmri_balloon.BalloonModel attribute) e0 (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) e_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) edge_lengths (tvb.datatypes.surfaces.Surface attribute) edge_max_length (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.datatypes.surfaces.Surface attribute) edge_mean_length (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.datatypes.surfaces.Surface attribute) edge_min_length (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.datatypes.surfaces.Surface attribute) edge_source (tvb.dsl.NeuroML.lems.model.dynamics.KineticScheme attribute) (tvb.dsl_cuda.lems.model.dynamics.KineticScheme attribute) edge_target (tvb.dsl.NeuroML.lems.model.dynamics.KineticScheme attribute) (tvb.dsl_cuda.lems.model.dynamics.KineticScheme attribute) edge_triangles (tvb.datatypes.surfaces.Surface attribute) edges (tvb.datatypes.surfaces.Surface attribute) (tvb.dsl.NeuroML.lems.model.dynamics.KineticScheme attribute) (tvb.dsl_cuda.lems.model.dynamics.KineticScheme attribute) edit_model_parameters() (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController method) edit_result_figure() (tvb.core.services.figure_service.FigureService method) edit_user() (tvb.core.services.user_service.UserService method) EditForm (class in tvb.interfaces.web.controllers.project.project_controller) editone() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) EditPreview (class in tvb.interfaces.web.controllers.project.figure_controller) editresultfigures() (tvb.interfaces.web.controllers.project.figure_controller.FigureController method) editstructure() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) EditUserForm (class in tvb.interfaces.web.controllers.users_controller) EEG (class in tvb.simulator.monitors) eeg (tvb.contrib.scripts.datatypes.projections.TvbProjectionType attribute) EEG (tvb.contrib.scripts.datatypes.time_series.PossibleVariables attribute) (tvb.datatypes.projections.ProjectionsType attribute) eeg_projection (tvb.contrib.scripts.datatypes.head.Head attribute) eeg_sensors (tvb.contrib.scripts.datatypes.head.Head attribute) EEGCap (class in tvb.datatypes.surfaces) EEGCapSurface (class in tvb.contrib.scripts.datatypes.surface) EEGMatTimeSeriesImporterModel (class in tvb.adapters.uploaders.mat_timeseries_eeg_importer) EegMonitor (class in tvb.adapters.visualizers.eeg_monitor) EEGMonitorForm (class in tvb.adapters.simulator.monitor_forms) EegMonitorForm (class in tvb.adapters.visualizers.eeg_monitor) EegMonitorModel (class in tvb.adapters.visualizers.eeg_monitor) EEGRegionMatTimeSeriesImporterForm (class in tvb.adapters.uploaders.mat_timeseries_eeg_importer) EEGRegionTimeSeriesImporter (class in tvb.adapters.uploaders.mat_timeseries_eeg_importer) EEGsensor_labels (tvb.contrib.scripts.datatypes.time_series.TimeSeriesEEG attribute) EEGViewModel (class in tvb.core.entities.file.simulator.view_model) efficiency_bin() (in module tvb.analyzers.graph) elec_inds (tvb.contrib.scripts.datatypes.sensors.SensorsInternal attribute) elec_labels (tvb.contrib.scripts.datatypes.sensors.SensorsInternal attribute) ELEM_ROOT (tvb.core.entities.file.xml_metadata_handlers.XMLWriter attribute) email (tvb.core.entities.model.model_project.User attribute) empty_msg (tvb.interfaces.web.controllers.users_controller.KeycloakLoginForm attribute) (tvb.interfaces.web.controllers.users_controller.LoginForm attribute) encrypt_inputs() (tvb.core.services.encryption_handler.EncryptionHandler method) encrypt_password() (tvb.core.adapters.abcuploader.ABCUploader static method) encrypted_aes_key (tvb.core.neotraits.uploader_view_model.UploaderViewModel attribute) encrypted_dir_name_regex (tvb.core.services.encryption_handler.EncryptionHandler attribute) encrypted_suffix (tvb.core.services.encryption_handler.EncryptionHandler attribute) encryption_config() (tvb.interfaces.web.controllers.hpc_controller.HPCController method) EncryptionHandler (class in tvb.core.services.encryption_handler) end_a (tvb.dsl.NeuroML.lems.model.structure.Tunnel attribute) (tvb.dsl_cuda.lems.model.structure.Tunnel attribute) end_b (tvb.dsl.NeuroML.lems.model.structure.Tunnel attribute) (tvb.dsl_cuda.lems.model.structure.Tunnel attribute) end_time (tvb.contrib.scripts.datatypes.time_series.TimeSeries attribute) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries attribute) EnhancedDictionary (class in tvb.basic.config.utils) ensure_background() (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiser method) ensure_float() (in module tvb.core.neotraits.db) ensure_int() (in module tvb.core.neotraits.db) ensure_list() (in module tvb.contrib.scripts.utils.data_structures_utils) (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) ensure_shell_surface() (in module tvb.adapters.visualizers.surface_view) ensure_string() (in module tvb.contrib.scripts.utils.data_structures_utils) ensure_unique_file() (in module tvb.contrib.scripts.utils.file_utils) env (tvb.basic.profile.TvbProfile attribute) Environment (class in tvb.basic.config.environment) eo (tvb.contrib.simulator.models.jansen_rit_david.JansenRitDavid attribute) Epileptor (class in tvb.simulator.models.epileptor) EPILEPTOR (tvb.simulator.models.ModelsEnum attribute) Epileptor2D (class in tvb.simulator.models.epileptor) Epileptor2DModelForm (class in tvb.adapters.simulator.model_forms) EPILEPTOR_2D (tvb.simulator.models.ModelsEnum attribute) EPILEPTOR_CODIM_3 (tvb.simulator.models.ModelsEnum attribute) EPILEPTOR_CODIM_3_SLOW (tvb.simulator.models.ModelsEnum attribute) EPILEPTOR_RS (tvb.simulator.models.ModelsEnum attribute) EpileptorCodim3ModelForm (class in tvb.adapters.simulator.model_forms) EpileptorCodim3SlowModModelForm (class in tvb.adapters.simulator.model_forms) EpileptorModelForm (class in tvb.adapters.simulator.model_forms) EpileptorRestingStateModelForm (class in tvb.adapters.simulator.model_forms) epoch_length (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.analyzers.node_complex_coherence.NodeComplexCoherence attribute) (tvb.datatypes.spectral.ComplexCoherenceSpectrum attribute) epsilon (tvb.analyzers.fmri_balloon.BalloonModel attribute) Equation (class in tvb.datatypes.equations) EQUATION (tvb.adapters.simulator.subform_helper.SubformHelper.FormToConfigEnum attribute) (tvb.adapters.simulator.subforms_mapping.SubformsEnum attribute)

equation (tvb.contrib.scripts.datatypes.lookup_tables.LookUpTable attribute) (tvb.datatypes.equations.Alpha attribute) (tvb.datatypes.equations.Cosine attribute) (tvb.datatypes.equations.DiscreteEquation attribute) (tvb.datatypes.equations.DoubleExponential attribute) (tvb.datatypes.equations.DoubleGaussian attribute) (tvb.datatypes.equations.Equation attribute) (tvb.datatypes.equations.FirstOrderVolterra attribute) (tvb.datatypes.equations.Gamma attribute) (tvb.datatypes.equations.Gaussian attribute) (tvb.datatypes.equations.GeneralizedSigmoid attribute) (tvb.datatypes.equations.Linear attribute) (tvb.datatypes.equations.MixtureOfGammas attribute) (tvb.datatypes.equations.PulseTrain attribute) (tvb.datatypes.equations.Sigmoid attribute) (tvb.datatypes.equations.Sinusoid attribute) (tvb.datatypes.local_connectivity.LocalConnectivity attribute) equation_choices (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersForm attribute) EQUATION_FIELD (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController attribute) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController attribute) EQUATION_PARAMS_FIELD (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController attribute) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController attribute) EquationAttr (class in tvb.core.neotraits.view_model) EquationForm (class in tvb.adapters.simulator.equation_forms) EquationPlotForm (class in tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller) EquationScalar (class in tvb.core.neotraits._h5accessors) EquationSpatialPlotForm (class in tvb.interfaces.web.controllers.spatial.surface_stimulus_controller) EquationTemporalPlotForm (class in tvb.interfaces.web.controllers.spatial.surface_stimulus_controller) error() (tvb.interfaces.web.controllers.base_controller.BaseController method) error_message (tvb.core.entities.model.model_burst.BurstConfiguration attribute) es_icvar (tvb.simulator.history.DenseHistory attribute) es_idelays (tvb.simulator.history.DenseHistory attribute) es_node_ids (tvb.simulator.history.DenseHistory attribute) es_weights (tvb.simulator.history.DenseHistory attribute) estimated_disk_size (tvb.core.entities.model.model_operation.Operation attribute) eta (tvb.contrib.simulator.models.generic_2d_oscillator.Generic2dOscillator attribute) EulerDeterministic (class in tvb.simulator.integrators) EulerDeterministicIntegratorForm (class in tvb.adapters.simulator.integrator_forms) EulerDeterministicViewModel (class in tvb.core.entities.file.simulator.view_model) EulerStochastic (class in tvb.simulator.integrators) EulerStochasticIntegratorForm (class in tvb.adapters.simulator.integrator_forms) EulerStochasticViewModel (class in tvb.core.entities.file.simulator.view_model) evaluate() (tvb.analyzers.fft.FFT method) (tvb.analyzers.fmri_balloon.BalloonModel method) (tvb.analyzers.ica.FastICA method) (tvb.analyzers.metric_kuramoto_index.KuramotoIndex method) (tvb.analyzers.metric_proxy_metastability.ProxyMetastabilitySynchrony method) (tvb.analyzers.metric_variance_global.GlobalVariance method) (tvb.analyzers.metric_variance_of_node_variance.VarianceNodeVariance method) (tvb.analyzers.metrics_base.BaseTimeseriesMetricAlgorithm method) (tvb.analyzers.node_coherence.NodeCoherence method) (tvb.analyzers.node_complex_coherence.NodeComplexCoherence method) (tvb.analyzers.pca.PCA method) (tvb.analyzers.wavelet.ContinuousWaveletTransform method) (tvb.datatypes.equations.DoubleExponential method) (tvb.datatypes.equations.Equation method) (tvb.datatypes.equations.Gamma method) (tvb.datatypes.equations.MixtureOfGammas method) (tvb.datatypes.equations.PulseTrain method) event_connections (tvb.dsl.NeuroML.lems.model.structure.ForEach attribute) (tvb.dsl.NeuroML.lems.model.structure.Structure attribute) (tvb.dsl_cuda.lems.model.structure.ForEach attribute) (tvb.dsl_cuda.lems.model.structure.Structure attribute) event_handlers (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral attribute) (tvb.dsl_cuda.lems.model.dynamics.Behavioral attribute) event_ports (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) event_records (tvb.dsl.NeuroML.lems.model.simulation.Simulation attribute) (tvb.dsl_cuda.lems.model.simulation.Simulation attribute) event_writers (tvb.dsl.NeuroML.lems.model.simulation.Simulation attribute) (tvb.dsl_cuda.lems.model.simulation.Simulation attribute) EventConnection (class in tvb.dsl.NeuroML.lems.model.structure) (class in tvb.dsl_cuda.lems.model.structure) EventHandler (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) EventOut (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) EventPort (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) eventPort (tvb.dsl.NeuroML.lems.model.simulation.EventRecord attribute) (tvb.dsl_cuda.lems.model.simulation.EventRecord attribute) EventRecord (class in tvb.dsl.NeuroML.lems.model.simulation) (class in tvb.dsl_cuda.lems.model.simulation) EventWriter (class in tvb.dsl.NeuroML.lems.model.simulation) (class in tvb.dsl_cuda.lems.model.simulation) EXCEPTION_DATATYPE_GROUP (tvb.core.entities.storage.root_dao.RootDAO attribute) EXCEPTION_DATATYPE_SIMULATION (tvb.core.entities.storage.root_dao.RootDAO attribute) exclude_sliders (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive attribute) execute() (tvb.core.services.backend_client_factory.BackendClientFactory static method) (tvb.core.services.backend_clients.backend_client.BackendClient static method) (tvb.core.services.backend_clients.cluster_scheduler_client.ClusterSchedulerClient static method) (tvb.core.services.backend_clients.hpc_scheduler_client.HPCSchedulerClient static method) (tvb.core.services.backend_clients.standalone_client.StandAloneClient static method) execute_command() (in module tvb.contrib.scripts.utils.command_line_utils) execute_matlab() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) execute_post() (tvb.interfaces.web.controllers.flow_controller.FlowController method) expand_params() (tvb.dsl_cuda.run.__main__.TVB_test method) expire_session() (in module tvb.interfaces.web.controllers.common) exponential() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) export() (tvb.adapters.exporters.abcexporter.ABCExporter method) (tvb.adapters.exporters.tvb_export.TVBExporter method) (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) export_data() (tvb.adapters.exporters.export_manager.ExportManager method) export_folder (tvb.adapters.exporters.export_manager.ExportManager attribute) EXPORT_FOLDER_NAME (tvb.adapters.exporters.export_manager.ExportManager attribute) export_project() (tvb.adapters.exporters.export_manager.ExportManager method) export_simulator_configuration() (tvb.adapters.exporters.export_manager.ExportManager method) export_to_dom() (tvb.dsl.NeuroML.lems.model.model.Model method) export_to_file() (tvb.dsl.NeuroML.lems.model.model.Model method) Exportable (class in tvb.core.entities.exportable) ExportException ExportManager (class in tvb.adapters.exporters.export_manager) expose_endpoint() (in module tvb.interfaces.web.controllers.decorators) expose_fragment() (in module tvb.interfaces.web.controllers.decorators) expose_json() (in module tvb.interfaces.web.controllers.decorators) expose_numpy_array() (in module tvb.interfaces.web.controllers.decorators) expose_page() (in module tvb.interfaces.web.controllers.decorators) expose_rest_api() (in module tvb.interfaces.web.run) Exposure (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) exposure (tvb.dsl.NeuroML.lems.model.dynamics.ConditionalDerivedVariable attribute) (tvb.dsl.NeuroML.lems.model.dynamics.DerivedVariable attribute) (tvb.dsl_cuda.lems.model.dynamics.ConditionalDerivedVariable attribute) (tvb.dsl_cuda.lems.model.dynamics.DerivedVariable attribute) exposures (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) expression (tvb.dsl.NeuroML.lems.model.dynamics.DerivedVariable attribute) (tvb.dsl.NeuroML.lems.model.dynamics.TimeDerivative attribute) (tvb.dsl_cuda.lems.model.component.DerivedParameter attribute) (tvb.dsl_cuda.lems.model.dynamics.DerivedVariable attribute) (tvb.dsl_cuda.lems.model.dynamics.TimeDerivative attribute) expression_tree (tvb.dsl.NeuroML.lems.model.dynamics.DerivedVariable attribute) (tvb.dsl.NeuroML.lems.model.dynamics.StateAssignment attribute) (tvb.dsl.NeuroML.lems.model.dynamics.TimeDerivative attribute) (tvb.dsl_cuda.lems.model.dynamics.DerivedVariable attribute) (tvb.dsl_cuda.lems.model.dynamics.StateAssignment attribute) (tvb.dsl_cuda.lems.model.dynamics.TimeDerivative attribute) ExprNode (class in tvb.dsl.NeuroML.lems.parser.expr) (class in tvb.dsl_cuda.lems.parser.expr) ExprParser (class in tvb.dsl.NeuroML.lems.parser.expr) (class in tvb.dsl_cuda.lems.parser.expr) extended_result_size() (tvb.analyzers.fft.FFT method) (tvb.analyzers.fmri_balloon.BalloonModel method) (tvb.analyzers.ica.FastICA method) (tvb.analyzers.node_coherence.NodeCoherence method) (tvb.analyzers.node_complex_coherence.NodeComplexCoherence method) (tvb.analyzers.pca.PCA method) (tvb.analyzers.wavelet.ContinuousWaveletTransform method) extends (tvb.dsl.NeuroML.lems.model.component.ComponentType attribute) (tvb.dsl_cuda.lems.model.component.ComponentType attribute) extract_dict_stringkeys() (in module tvb.contrib.scripts.utils.data_structures_utils) extract_file_from_request() (tvb.interfaces.rest.server.resources.rest_resource.RestResource static method) extract_integer_intervals() (in module tvb.contrib.scripts.utils.data_structures_utils) extract_matlab_doc_string() (in module tvb.core.utils) extract_operation_data() (tvb.adapters.simulator.hpc_simulator_adapter.HPCSimulatorAdapter method) (tvb.adapters.simulator.hpc_simulator_adapter.HPCTimeseriesMetricsAdapter method) (tvb.core.adapters.abcadapter.ABCAdapter method) extract_page_number() (tvb.interfaces.rest.server.resources.rest_resource.RestResource method) extract_source_labels() (tvb.adapters.visualizers.matrix_viewer.ABCMappedArraySVGVisualizer method)

F

f (tvb.simulator.models.oscillator.Generic2dOscillator attribute) f() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) f_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) FaceSurface (class in tvb.datatypes.surfaces) FaceSurfaceSurface (class in tvb.contrib.scripts.datatypes.surface) fail_on_missing_includes (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) FAILED (tvb.core.services.backend_clients.hpc_scheduler_client.HPCJobStatus attribute) FastICA (class in tvb.analyzers.ica) fastica() (in module tvb.analyzers.ica_algorithm) Fat (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) fat_components (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) FatComponent (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) fatten_component() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) Fcd (class in tvb.datatypes.fcd) FCDAdapterForm (class in tvb.adapters.analyzers.fcd_adapter) FCDAdapterModel (class in tvb.adapters.analyzers.fcd_adapter) FcdCalculator (class in tvb.adapters.analyzers.fcd_adapter) FcdH5 (class in tvb.adapters.datatypes.h5.fcd_h5) FcdIndex (class in tvb.adapters.datatypes.db.fcd) FFT (class in tvb.analyzers.fft) FFTAdapterForm (class in tvb.adapters.analyzers.fourier_adapter) FFTAdapterModel (class in tvb.adapters.analyzers.fourier_adapter) Field (class in tvb.core.neotraits.forms) fields (tvb.core.neotraits.forms.Form attribute) (tvb.interfaces.web.controllers.project.figure_controller.EditPreview attribute) (tvb.interfaces.web.controllers.project.project_controller.EditForm attribute) (tvb.interfaces.web.controllers.settings_controller.SettingsForm attribute) (tvb.interfaces.web.controllers.users_controller.EditUserForm attribute) (tvb.interfaces.web.controllers.users_controller.KeycloakLoginForm attribute) (tvb.interfaces.web.controllers.users_controller.LoginForm attribute) (tvb.interfaces.web.controllers.users_controller.RecoveryForm attribute) (tvb.interfaces.web.controllers.users_controller.RegisterForm attribute) FigureController (class in tvb.interfaces.web.controllers.project.figure_controller) FigureService (class in tvb.core.services.figure_service) file (tvb.dsl.NeuroML.lems.model.fundamental.Include attribute) (tvb.dsl_cuda.lems.model.fundamental.Include attribute) FILE_EXTENSION (tvb.core.entities.file.xml_metadata_handlers.XMLWriter attribute) file_format (tvb.core.entities.model.model_operation.ResultFigure attribute) file_handler (tvb.core.services.backend_clients.hpc_scheduler_client.HPCSchedulerClient attribute) file_name (tvb.core.entities.transient.structure_entities.GenericMetaData attribute) (tvb.dsl.NeuroML.lems.model.simulation.DataWriter attribute) (tvb.dsl.NeuroML.lems.model.simulation.EventWriter attribute) (tvb.dsl_cuda.lems.model.simulation.DataWriter attribute) (tvb.dsl_cuda.lems.model.simulation.EventWriter attribute) file_name_base() (tvb.core.neotraits._h5core.H5File class method) (tvb.core.neotraits.h5.H5File class method) file_path (tvb.core.entities.model.model_operation.ResultFigure attribute) file_type (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporterModel attribute) FileReader (class in tvb.basic.readers) FilesHelper (class in tvb.core.entities.file.files_helper) FileStorageException FileStructureException FilesUpdateManager (class in tvb.core.entities.file.files_update_manager) FileVersioningException fill_default_attributes() (tvb.interfaces.web.controllers.base_controller.BaseController method) (tvb.interfaces.web.controllers.burst.base_controller.BurstBaseController method) (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController method) (tvb.interfaces.web.controllers.flow_controller.FlowController method) (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) (tvb.interfaces.web.controllers.spatial.base_spatio_temporal_controller.SpatioTemporalController method) (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController method) (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController method) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController method) (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController method) (tvb.interfaces.web.controllers.users_controller.UserController method) fill_from() (tvb.core.entities.generic_attributes.GenericAttributes method) fill_from_datatype() (tvb.core.entities.transient.context_overlay.DataTypeOverlayDetails method) fill_from_default() (tvb.core.entities.transient.range_parameter.RangeParameter method) fill_from_generic_attributes() (tvb.core.entities.model.model_datatype.DataType method) fill_from_has_traits() (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex method) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex method) (tvb.adapters.datatypes.db.fcd.FcdIndex method) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex method) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex method) (tvb.adapters.datatypes.db.graph.CovarianceIndex method) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex method) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex method) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex method) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex method) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex method) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex method) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex method) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex method) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex method) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex method) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex method) (tvb.adapters.datatypes.db.sensors.SensorsIndex method) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex method) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex method) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex method) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex method) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex method) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex method) (tvb.adapters.datatypes.db.surface.SurfaceIndex method) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex method) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex method) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex method) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex method) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex method) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex method) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex method) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex method) (tvb.adapters.datatypes.db.tracts.TractsIndex method) (tvb.adapters.datatypes.db.volume.VolumeIndex method) (tvb.core.entities.model.model_datatype.DataType method) (tvb.core.entities.model.model_datatype.DataTypeMatrix method) fill_from_post() (tvb.adapters.simulator.equation_forms.EquationForm method) (tvb.adapters.simulator.monitor_forms.MonitorForm method) (tvb.adapters.simulator.simulator_fragments.SimulatorFinalFragment method) (tvb.adapters.simulator.simulator_fragments.SimulatorPSERangeFragment static method) (tvb.core.neotraits.forms.Field method) (tvb.core.neotraits.forms.Form method) (tvb.core.neotraits.forms.FormField method) (tvb.core.neotraits.forms.SelectField method) (tvb.core.neotraits.forms.TraitUploadField method) (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.TemporalPlotForm method) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.EquationPlotForm method) (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.EquationSpatialPlotForm method) (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.EquationTemporalPlotForm method) fill_from_post_plus_defaults() (tvb.core.adapters.abcadapter.ABCAdapterForm method) fill_from_single_post_param() (tvb.core.neotraits.forms.Form method) fill_from_trait() (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreatorForm method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorForm method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm method) (tvb.adapters.simulator.equation_forms.AlphaEquationForm method) (tvb.adapters.simulator.equation_forms.CosineEquationForm method) (tvb.adapters.simulator.equation_forms.DoubleExponentialEquationForm method) (tvb.adapters.simulator.equation_forms.DoubleGaussianEquationForm method) (tvb.adapters.simulator.equation_forms.FirstOrderVolterraEquationForm method) (tvb.adapters.simulator.equation_forms.GammaEquationForm method) (tvb.adapters.simulator.equation_forms.GaussianEquationForm method) (tvb.adapters.simulator.equation_forms.GeneralizedSigmoidEquationForm method) (tvb.adapters.simulator.equation_forms.LinearEquationForm method) (tvb.adapters.simulator.equation_forms.MixtureOfGammasEquationForm method) (tvb.adapters.simulator.equation_forms.PulseTrainEquationForm method) (tvb.adapters.simulator.equation_forms.SigmoidEquationForm method) (tvb.adapters.simulator.equation_forms.SinusoidEquationForm method) (tvb.adapters.simulator.integrator_forms.IntegratorStochasticForm method) (tvb.adapters.simulator.monitor_forms.BoldMonitorForm method) (tvb.adapters.simulator.monitor_forms.MonitorForm method) (tvb.adapters.simulator.monitor_forms.SpatialAverageMonitorForm method) (tvb.adapters.simulator.noise_forms.MultiplicativeNoiseForm method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapterForm method) (tvb.adapters.simulator.simulator_fragments.SimulatorIntegratorFragment method) (tvb.adapters.simulator.simulator_fragments.SimulatorModelFragment method) (tvb.adapters.simulator.simulator_fragments.SimulatorMonitorFragment method) (tvb.adapters.simulator.simulator_fragments.SimulatorStimulusFragment method) (tvb.core.neotraits.forms.Form method) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersForm method) fill_into() (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory method) fill_operationgroup_name() (tvb.core.entities.model.model_operation.OperationGroup method) fill_overlay_attributes() (tvb.interfaces.web.controllers.base_controller.BaseController method) fill_pse_context() (tvb.adapters.visualizers.pse.PSEDiscreteGroupModel method) fill_shape() (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex method) fill_trait() (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapterForm method) (tvb.adapters.simulator.equation_forms.AlphaEquationForm method) (tvb.adapters.simulator.equation_forms.CosineEquationForm method) (tvb.adapters.simulator.equation_forms.DoubleExponentialEquationForm method) (tvb.adapters.simulator.equation_forms.DoubleGaussianEquationForm method) (tvb.adapters.simulator.equation_forms.FirstOrderVolterraEquationForm method) (tvb.adapters.simulator.equation_forms.GammaEquationForm method) (tvb.adapters.simulator.equation_forms.GaussianEquationForm method) (tvb.adapters.simulator.equation_forms.GeneralizedSigmoidEquationForm method) (tvb.adapters.simulator.equation_forms.LinearEquationForm method) (tvb.adapters.simulator.equation_forms.MixtureOfGammasEquationForm method) (tvb.adapters.simulator.equation_forms.PulseTrainEquationForm method) (tvb.adapters.simulator.equation_forms.SigmoidEquationForm method) (tvb.adapters.simulator.equation_forms.SinusoidEquationForm method) (tvb.adapters.simulator.integrator_forms.IntegratorStochasticForm method) (tvb.adapters.simulator.monitor_forms.BoldMonitorForm method) (tvb.adapters.simulator.monitor_forms.MonitorForm method) (tvb.adapters.simulator.noise_forms.MultiplicativeNoiseForm method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapterForm method) (tvb.adapters.simulator.simulator_fragments.SimulatorIntegratorFragment method) (tvb.adapters.simulator.simulator_fragments.SimulatorModelFragment method) (tvb.adapters.simulator.simulator_fragments.SimulatorStimulusFragment method) (tvb.adapters.simulator.simulator_fragments.SimulatorSurfaceFragment method) (tvb.core.neotraits.forms.Form method) filter_category() (tvb.core.entities.storage.operation_dao.OperationDAO method) filter_regions() (tvb.contrib.scripts.datatypes.head.Head method) FilterChain (class in tvb.core.entities.filters.chain) Final (class in tvb.basic.neotraits._attr) (class in tvb.basic.neotraits.api) (class in tvb.simulator.descriptors) Final.State (class in tvb.simulator.descriptors) find_file_for_has_traits_type() (tvb.core.neocom._h5loader.DirLoader method) find_file_name() (tvb.core.neocom._h5loader.DirLoader method) find_labels_inds() (in module tvb.contrib.scripts.utils.data_structures_utils) find_project() (tvb.core.services.project_service.ProjectService method) find_project_lazy_by_gid() (tvb.core.services.project_service.ProjectService method) find_relative_path() (tvb.core.entities.file.files_helper.FilesHelper static method) finish_time (tvb.core.entities.model.model_burst.BurstConfiguration attribute) FiniteSupportEquation (class in tvb.datatypes.equations) fire_operation() (tvb.core.services.operation_service.OperationService method) FIRE_SIMULATION (tvb.interfaces.rest.commons.strings.RestLink attribute) fire_simulation() (in module tvb.interfaces.command.lab) (tvb.interfaces.rest.client.tvb_client.TVBClient method) FIRST_FORM_URL (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) first_n (tvb.simulator.plot.power_spectra_interactive.PowerSpectraInteractive attribute) (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive attribute) FIRST_RUN_STORAGE (tvb.basic.config.profile_settings.BaseSettingsProfile attribute) FirstOrderVolterra (class in tvb.datatypes.equations) FirstOrderVolterraEquationForm (class in tvb.adapters.simulator.equation_forms) Fixed (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) fixed (tvb.dsl.NeuroML.lems.model.component.Parameter attribute) (tvb.dsl_cuda.lems.model.component.Parameter attribute) fixed_generic_attributes (tvb.core.entities.model.model_datatype.DataType attribute) fixed_value (tvb.dsl.NeuroML.lems.model.component.Parameter attribute) (tvb.dsl_cuda.lems.model.component.Parameter attribute) fk_admin (tvb.core.entities.model.model_project.Project attribute) fk_brain_skull_gid (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) fk_category (tvb.core.entities.model.model_operation.Algorithm attribute) fk_connectivity_gid (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) fk_datatype_gid (tvb.core.entities.model.model_datatype.MeasurePointsSelection attribute) (tvb.core.entities.model.model_datatype.StoredPSEFilter attribute) fk_datatype_group (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute)

fk_for_user (tvb.core.entities.model.model_operation.ResultFigure attribute) fk_from_algo (tvb.core.entities.model.model_operation.Operation attribute) fk_from_datatype (tvb.core.entities.model.model_datatype.Links attribute) fk_from_operation (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) (tvb.core.entities.model.model_operation.OperationProcessIdentifier attribute) fk_in_project (tvb.core.entities.model.model_datatype.MeasurePointsSelection attribute) (tvb.core.entities.model.model_operation.ResultFigure attribute) fk_launched_by (tvb.core.entities.model.model_operation.Operation attribute) fk_launched_in (tvb.core.entities.model.model_operation.Operation attribute) (tvb.core.entities.model.model_operation.OperationGroup attribute) fk_metric_operation_group (tvb.core.entities.model.model_burst.BurstConfiguration attribute) fk_operation_group (tvb.core.entities.model.model_burst.BurstConfiguration attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_operation.Operation attribute) fk_parent_burst (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) fk_project (tvb.core.entities.model.model_burst.BurstConfiguration attribute) (tvb.core.entities.model.model_project.User_to_Project attribute) fk_region_mapping_gid (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) fk_region_mapping_volume_gid (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) fk_region_volume_map_gid (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) fk_sensors_gid (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) fk_simulation (tvb.core.entities.model.model_burst.BurstConfiguration attribute) fk_skin_air_gid (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) fk_skull_skin_gid (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) fk_source_gid (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) fk_surface_gid (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) fk_to_project (tvb.core.entities.model.model_datatype.Links attribute) fk_user (tvb.core.entities.model.model_burst.Dynamic attribute) (tvb.core.entities.model.model_project.UserPreferences attribute) (tvb.core.entities.model.model_project.User_to_Project attribute) fk_volume_gid (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) Flair (class in tvb.contrib.scripts.datatypes.structural) flair (tvb.contrib.scripts.datatypes.head.Head attribute) flatten_list() (in module tvb.contrib.scripts.utils.data_structures_utils) flatten_tuple() (in module tvb.contrib.scripts.utils.data_structures_utils) flattened (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries attribute) Float (class in tvb.basic.neotraits._attr) (class in tvb.basic.neotraits.api) FloatField (class in tvb.core.neotraits.forms) FLOW (tvb.core.adapters.abcdisplayer.URLGenerator attribute) FlowCoefficients (class in tvb.adapters.analyzers.bct_centrality_adapters) FlowController (class in tvb.interfaces.web.controllers.flow_controller) flush_buffered_data() (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager.H5pyStorageBuffer method) focal_points_surface (tvb.datatypes.patterns.StimuliSurface attribute) focal_points_triangles (tvb.datatypes.patterns.StimuliSurface attribute) focal_points_volume (tvb.datatypes.patterns.SpatialPatternVolume attribute) FooDataImporter (class in tvb.interfaces.command.demos.importers.new_importer) for_eachs (tvb.dsl.NeuroML.lems.model.structure.ForEach attribute) (tvb.dsl.NeuroML.lems.model.structure.Structure attribute) (tvb.dsl_cuda.lems.model.structure.ForEach attribute) (tvb.dsl_cuda.lems.model.structure.Structure attribute) ForEach (class in tvb.dsl.NeuroML.lems.model.structure) (class in tvb.dsl_cuda.lems.model.structure) Form (class in tvb.core.neotraits.forms) formal_repr() (in module tvb.contrib.scripts.utils.data_structures_utils) format (tvb.dsl.NeuroML.lems.model.simulation.EventWriter attribute) (tvb.dsl_cuda.lems.model.simulation.EventWriter attribute) format_all_numbers_in_strings() (in module tvb.contrib.scripts.utils.data_structures_utils) format_bytes_human() (in module tvb.core.utils) format_timedelta() (in module tvb.core.utils) FormField (class in tvb.core.neotraits.forms) FormKeyInput (class in tvb.interfaces.rest.commons.strings) FormWithRanges (class in tvb.adapters.simulator.form_with_ranges) forward_rate (tvb.dsl.NeuroML.lems.model.dynamics.KineticScheme attribute) (tvb.dsl_cuda.lems.model.dynamics.KineticScheme attribute) FourierAdapter (class in tvb.adapters.analyzers.fourier_adapter) FourierSpectrum (class in tvb.datatypes.spectral) FourierSpectrumDisplay (class in tvb.adapters.visualizers.fourier_spectrum) FourierSpectrumForm (class in tvb.adapters.visualizers.fourier_spectrum) FourierSpectrumH5 (class in tvb.adapters.datatypes.h5.spectral_h5) FourierSpectrumIndex (class in tvb.adapters.datatypes.db.spectral) FourierSpectrumModel (class in tvb.adapters.visualizers.fourier_spectrum) fractions (tvb.datatypes.mode_decompositions.PrincipalComponents attribute) freq_step (tvb.datatypes.spectral.ComplexCoherenceSpectrum attribute) (tvb.datatypes.spectral.FourierSpectrum attribute) frequencies (tvb.analyzers.wavelet.ContinuousWaveletTransform attribute) (tvb.datatypes.spectral.WaveletCoefficients attribute) frequencies_max (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) frequencies_min (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) frequency (tvb.datatypes.spectral.CoherenceSpectrum attribute) (tvb.datatypes.spectral.ComplexCoherenceSpectrum attribute) (tvb.datatypes.spectral.FourierSpectrum attribute) (tvb.datatypes.spectral.WaveletCoefficients attribute) frequency_step (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) from_ (tvb.dsl.NeuroML.lems.model.structure.EventConnection attribute) (tvb.dsl_cuda.lems.model.structure.EventConnection attribute) from_array() (tvb.core.neotraits._h5accessors.DataSetMetaData class method) (tvb.core.neotraits._h5accessors.SparseMatrixMetaData class method) from_dict() (tvb.core.entities.exportable.Exportable method) (tvb.core.entities.model.model_operation.Operation method) (tvb.core.entities.model.model_operation.ResultFigure method) (tvb.core.entities.model.model_project.Project method) (tvb.core.neotraits._h5accessors.DataSetMetaData class method) (tvb.core.neotraits._h5accessors.SparseMatrixMetaData class method) from_file() (tvb.contrib.scripts.datatypes.head.Head class method) (tvb.contrib.scripts.datatypes.lookup_tables.NerfTable static method) (tvb.contrib.scripts.datatypes.lookup_tables.PsiTable static method) (tvb.core.neotraits._h5core.H5File static method) (tvb.core.neotraits.h5.H5File static method) (tvb.datatypes.connectivity.Connectivity static method) (tvb.datatypes.cortex.Cortex class method) (tvb.datatypes.local_connectivity.LocalConnectivity static method) (tvb.datatypes.projections.ProjectionMatrix class method) (tvb.datatypes.projections.ProjectionSurfaceEEG class method) (tvb.datatypes.projections.ProjectionSurfaceMEG class method) (tvb.datatypes.projections.ProjectionSurfaceSEEG class method) (tvb.datatypes.region_mapping.RegionMapping static method) (tvb.datatypes.sensors.Sensors class method) (tvb.datatypes.sensors.SensorsInternal class method) (tvb.datatypes.sensors.SensorsMEG class method) (tvb.datatypes.surfaces.BrainSkull class method) (tvb.datatypes.surfaces.EEGCap class method) (tvb.datatypes.surfaces.FaceSurface class method) (tvb.datatypes.surfaces.SkinAir class method) (tvb.datatypes.surfaces.SkullSkin class method) (tvb.datatypes.surfaces.Surface class method) (tvb.simulator.monitors.EEG class method) (tvb.simulator.monitors.MEG class method) (tvb.simulator.monitors.Projection class method) (tvb.simulator.monitors.iEEG class method) from_folder() (tvb.contrib.scripts.datatypes.head.Head class method) from_h5_file() (tvb.contrib.scripts.datatypes.base.BaseModel class method) from_instance() (tvb.contrib.scripts.datatypes.base.BaseModel static method) from_json() (tvb.core.entities.filters.chain.FilterChain class method) (tvb.core.entities.transient.range_parameter.RangeParameter static method) from_ndarray() (in module tvb.core.neotraits.db) from_numpy() (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) from_trait() (tvb.core.neotraits.forms.TraitDataTypeSelectField method) (tvb.core.neotraits.forms.TraitField method) from_tvb_file() (tvb.contrib.scripts.datatypes.base.BaseModel class method) (tvb.contrib.scripts.datatypes.head.Head class method) (tvb.contrib.scripts.datatypes.projections.ProjectionMatrix class method) (tvb.contrib.scripts.datatypes.projections.ProjectionSurfaceEEG class method) (tvb.contrib.scripts.datatypes.projections.ProjectionSurfaceMEG class method) (tvb.contrib.scripts.datatypes.projections.ProjectionSurfaceSEEG class method) from_tvb_instance() (tvb.contrib.scripts.datatypes.base.BaseModel class method) from_TVB_time_series() (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) from_xarray_DataArray() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) FS (tvb.interfaces.command.benchmark.Bench attribute) FULL_VIEW (tvb.core.entities.filters.factory.StaticFiltersFactory attribute) func (tvb.dsl.NeuroML.lems.parser.expr.Func1Node attribute) (tvb.dsl_cuda.lems.parser.expr.Func1Node attribute) FUNC1 (tvb.dsl.NeuroML.lems.parser.expr.ExprNode attribute) (tvb.dsl_cuda.lems.parser.expr.ExprNode attribute) Func1Node (class in tvb.dsl.NeuroML.lems.parser.expr) (class in tvb.dsl_cuda.lems.parser.expr) Function (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) function_sensors_to_surface() (in module tvb.adapters.visualizers.sensors) FunctionalConnectivityDynamicsAdapter (class in tvb.adapters.analyzers.fcd_adapter)

G

G (tvb.simulator.coupling.PreSigmoidal attribute) g (tvb.simulator.models.oscillator.Generic2dOscillator attribute) G_e (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) g_e (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) G_i (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) g_i (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) gain (tvb.simulator.monitors.Projection attribute) Gamma (class in tvb.datatypes.equations) gamma (tvb.contrib.simulator.models.generic_2d_oscillator.Generic2dOscillator attribute) (tvb.contrib.simulator.models.wong_wang.WongWang attribute) (tvb.simulator.models.linear.Linear attribute) (tvb.simulator.models.oscillator.Generic2dOscillator attribute) (tvb.simulator.models.wong_wang.ReducedWongWang attribute) gamma() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) gamma_1 (tvb.contrib.simulator.models.jansen_rit_david.JansenRitDavid attribute) (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) gamma_1T (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) gamma_2 (tvb.contrib.simulator.models.jansen_rit_david.JansenRitDavid attribute) (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) gamma_2T (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) gamma_3 (tvb.contrib.simulator.models.jansen_rit_david.JansenRitDavid attribute) (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) gamma_3T (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) gamma_4 (tvb.contrib.simulator.models.jansen_rit_david.JansenRitDavid attribute) (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) gamma_5 (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) gamma_e (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) gamma_i (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) GammaEquationForm (class in tvb.adapters.simulator.equation_forms) gAMPAext_e (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) gAMPAext_i (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) gAMPArec_e (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) gAMPArec_i (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) GAST_SCHMIDT_KNOSCHE_SD (tvb.simulator.models.ModelsEnum attribute) GAST_SCHMIDT_KNOSCHE_SF (tvb.simulator.models.ModelsEnum attribute) gather_all_references_by_index() (in module tvb.core.neocom.h5) gather_all_references_of_view_model() (in module tvb.core.neocom.h5) gather_references() (tvb.core.neotraits._h5core.H5File method) (tvb.core.neotraits.h5.H5File method) gather_references_by_uuid() (tvb.core.neotraits._h5core.ViewModelH5 method) Gaussian (class in tvb.datatypes.equations) GaussianEquationForm (class in tvb.adapters.simulator.equation_forms) gCa (tvb.contrib.simulator.models.larter.Larter attribute) (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.contrib.simulator.models.morris_lecar.MorrisLecar attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) GeneralizedSigmoid (class in tvb.datatypes.equations) GeneralizedSigmoidEquationForm (class in tvb.adapters.simulator.equation_forms) generate() (tvb.simulator.noise.Noise method), [1] generate_call_out_control() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) generate_guid() (in module tvb.core.utils) generate_preview() (tvb.adapters.visualizers.brain.BrainViewer method) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplay method) (tvb.adapters.visualizers.connectivity.ConnectivityViewer method) (tvb.adapters.visualizers.eeg_monitor.EegMonitor method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumDisplay method) (tvb.adapters.visualizers.histogram.HistogramViewer method) (tvb.adapters.visualizers.matrix_viewer.ABCMappedArraySVGVisualizer method) (tvb.adapters.visualizers.pca.PCA method) (tvb.adapters.visualizers.time_series.TimeSeriesDisplay method) (tvb.adapters.visualizers.topographic.TopographicViewer method) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizer method) (tvb.core.adapters.abcdisplayer.ABCDisplayer method) generate_random_password() (tvb.core.services.encryption_handler.EncryptionHandler static method) generate_region_boundaries() (tvb.adapters.visualizers.surface_view.ABCSurfaceDisplayer method) generate_region_labels() (in module tvb.contrib.scripts.utils.data_structures_utils) generate_surrogate_connectivity() (tvb.datatypes.connectivity.Connectivity method) Generic2dOscillator (class in tvb.contrib.simulator.models.generic_2d_oscillator) (class in tvb.simulator.models.oscillator) Generic2dOscillatorModelForm (class in tvb.adapters.simulator.model_forms) GENERIC_2D_OSCILLATOR (tvb.simulator.models.ModelsEnum attribute) GenericAttributes (class in tvb.core.entities.generic_attributes) GenericMetaData (class in tvb.core.entities.transient.structure_entities) geodesic_distance() (tvb.datatypes.surfaces.Surface method) geodesic_distance_matrix (tvb.datatypes.surfaces.Surface attribute) geometric() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) get_activation_patterns() (tvb.adapters.datatypes.h5.annotation_h5.ConnectivityAnnotations method) get_adapter_fragments() (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter method) (tvb.core.adapters.abcadapter.ABCAdapter method) get_adapter_template() (tvb.interfaces.web.controllers.flow_controller.FlowController method) get_adapters_chain() (tvb.core.portlets.xml_reader.XMLPortletReader method) get_adapters_from_categories() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_administrators() (tvb.core.entities.storage.project_dao.CaseDAO method) (tvb.core.services.user_service.UserService static method) get_algorithm_by_id() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_algorithm_by_identifier() (tvb.core.services.algorithm_service.AlgorithmService static method) get_algorithm_by_module() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_algorithm_by_module_and_class() (tvb.core.services.algorithm_service.AlgorithmService static method) get_algorithm_categories() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_algorithms_dictionary() (tvb.core.portlets.xml_reader.XMLPortletReader method) get_all_datatypes() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_all_metrics() (tvb.adapters.visualizers.pse.PSEGroupModel method) get_all_node_info() (tvb.adapters.visualizers.pse.PSEGroupModel method) (tvb.adapters.visualizers.pse_isocline.PSEIsoGroupModel method) get_all_operations_for_uploaders() (tvb.core.entities.storage.operation_dao.OperationDAO method) (tvb.core.services.project_service.ProjectService static method) get_all_projects() (tvb.core.entities.storage.project_dao.CaseDAO method) get_all_range_parameters() (tvb.adapters.simulator.range_parameters.SimulatorRangeParameters method) get_all_users() (tvb.core.entities.storage.project_dao.CaseDAO method) get_allen_mouse_cache_folder() (tvb.core.entities.file.files_helper.FilesHelper method) get_analyze_groups() (tvb.core.services.algorithm_service.AlgorithmService static method) get_applicable_adapters() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_array_data() (tvb.adapters.datatypes.h5.graph_h5.ConnectivityMeasureH5 method) get_attribute() (tvb.basic.config.stored.SettingsManager method) get_available_bursts() (tvb.core.services.burst_service.BurstService static method) get_available_metric_keys() (tvb.adapters.visualizers.pse.PSEGroupModel method) get_available_portlets() (tvb.core.entities.storage.workflow_dao.WorkflowDAO method) get_available_selections() (tvb.interfaces.web.controllers.flow_controller.FlowController method) get_base_datatype_for_h5file() (tvb.core.neocom._registry.Registry method) get_base_model_subclasses() (tvb.simulator.models.ModelsEnum static method) get_bipolar() (tvb.contrib.scripts.datatypes.time_series.TimeSeriesSensors method) get_bipolar_elecs() (tvb.contrib.scripts.datatypes.sensors.SensorsInternal method) get_bipolar_sensors() (tvb.contrib.scripts.datatypes.sensors.Sensors method) get_burst_by_id() (tvb.core.entities.storage.burst_dao.BurstDAO method) get_burst_for_direct_operation_id() (tvb.core.entities.storage.burst_dao.BurstDAO method) get_burst_for_operation_id() (tvb.core.entities.storage.burst_dao.BurstDAO method) (tvb.core.services.burst_service.BurstService static method) get_bursts_for_project() (tvb.core.entities.storage.burst_dao.BurstDAO method) get_cached_dynamic() (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController method) get_cached_metadata() (tvb.core.neotraits._h5accessors.DataSet method) (tvb.core.neotraits.h5.DataSet method) get_category_by_id() (tvb.core.entities.storage.operation_dao.OperationDAO method) (tvb.core.services.algorithm_service.AlgorithmService static method) get_centres() (tvb.adapters.datatypes.h5.connectivity_h5.ConnectivityH5 method) get_class() (tvb.simulator.models.ModelsEnum method) get_class_by_name() (in module tvb.core.entities.load) get_class_for_field_value() (tvb.adapters.simulator.subform_helper.SubformHelper static method) get_color() (in module tvb.simulator.plot.phase_plane_interactive) get_color_schemes_json() (tvb.interfaces.web.controllers.users_controller.UserController method) get_components_sizes() (in module tvb.analyzers.graph) get_configure_info() (tvb.interfaces.web.entities.context_model_parameters.SurfaceContextModelParameters method) get_connectivity() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) get_connectivity_parameters() (tvb.adapters.visualizers.connectivity.ConnectivityViewer static method) get_correlation_data() (tvb.adapters.datatypes.h5.graph_h5.CorrelationCoefficientsH5 method) get_coupling_to_form_dict() (in module tvb.adapters.simulator.coupling_forms) get_current_project() (in module tvb.interfaces.web.controllers.common) get_current_user() (in module tvb.interfaces.rest.server.request_helper) get_data() (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager method) get_data_for_model_param() (tvb.interfaces.web.entities.context_model_parameters.SurfaceContextModelParameters method) get_data_from_burst_configuration() (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController method) get_data_from_slice() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) get_data_in_project() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.interfaces.rest.client.tvb_client.TVBClient method) get_data_shape() (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex method) (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager method) get_data_uploader_overlay() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) GET_DATATYPE (tvb.interfaces.rest.commons.strings.RestLink attribute) get_datatype_and_datatypegroup_inputs_for_operation() (tvb.core.services.project_service.ProjectService method) get_datatype_by_gid() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_datatype_by_id() (tvb.core.entities.storage.root_dao.RootDAO method) (tvb.core.services.project_service.ProjectService static method) get_datatype_details() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.core.services.project_service.ProjectService static method) (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) get_datatype_extra_info() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_datatype_for_h5file() (tvb.core.neocom._registry.Registry method) get_datatype_for_index() (tvb.core.neocom._registry.Registry method) get_datatype_group_by_gid() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_datatype_group_disk_size() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_datatype_in_group() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.core.services.project_service.ProjectService static method) get_datatype_operations() (tvb.interfaces.rest.server.facades.datatype_facade.DatatypeFacade method) get_datatypegroup_by_gid() (tvb.core.services.project_service.ProjectService static method) get_datatypegroup_by_op_group_id() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.core.services.project_service.ProjectService static method) get_datatypes_for_range() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_datatypes_from_datatype_group() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.core.services.project_service.ProjectService static method) get_datatypes_in_project() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.core.services.project_service.ProjectService static method) (tvb.interfaces.rest.server.facades.project_facade.ProjectFacade method) get_default_message() (tvb.interfaces.rest.commons.exceptions.AuthorizationRequestException method) (tvb.interfaces.rest.commons.exceptions.BadRequestException method) (tvb.interfaces.rest.commons.exceptions.BaseRestException method) (tvb.interfaces.rest.commons.exceptions.ClientException method) (tvb.interfaces.rest.commons.exceptions.InvalidIdentifierException method) (tvb.interfaces.rest.commons.exceptions.InvalidInputException method) (tvb.interfaces.rest.commons.exceptions.ServiceException method) get_default_pse_viewer() (tvb.interfaces.web.controllers.burst.exploration_controller.ParameterExplorationController method) get_default_selection() (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesH5 method) (tvb.datatypes.connectivity.Connectivity method) get_default_weights() (tvb.datatypes.patterns.StimuliRegion static method) get_dimension_index() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_dimension_labels() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_dimension_name() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_disk_free_space() (tvb.core.services.settings_service.SettingsService static method) get_disk_size_for_operation() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_dt_from_db() (tvb.core.neotraits.forms.TraitDataTypeSelectField method) get_dt_h5_path() (tvb.interfaces.rest.server.facades.datatype_facade.DatatypeFacade static method) get_dynamic() (tvb.core.entities.storage.workflow_dao.WorkflowDAO method) get_dynamic_by_name() (tvb.core.entities.storage.workflow_dao.WorkflowDAO method) get_dynamic_filters (tvb.core.neotraits.forms.TraitDataTypeSelectField attribute) get_dynamics_for_user() (tvb.core.entities.storage.workflow_dao.WorkflowDAO method) get_elecs_inds_by_elecs_labels() (tvb.contrib.scripts.datatypes.sensors.SensorsInternal method) get_encrypted_dir() (tvb.core.services.encryption_handler.EncryptionHandler method) get_equation_chart() (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController method) (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController method) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController method) get_equation_for_parameter() (tvb.interfaces.web.entities.context_model_parameters.SurfaceContextModelParameters method) get_equation_to_form_dict() (in module tvb.adapters.simulator.equation_forms) get_errors_dict() (tvb.core.neotraits.forms.Form method) get_execution_time_approximation() (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter method) (tvb.core.adapters.abcadapter.ABCAdapter method) get_export_file_extension() (tvb.adapters.exporters.abcexporter.ABCExporter method) (tvb.adapters.exporters.tvb_export.TVBExporter method) get_export_file_name() (tvb.adapters.exporters.abcexporter.ABCExporter method) get_exporters_for_data() (tvb.adapters.exporters.export_manager.ExportManager method) get_external_db_user() (tvb.core.services.user_service.UserService method) get_extra_algorithm_filters() (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapterForm static method) get_extra_info() (tvb.adapters.datatypes.db.fcd.FcdIndex method) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex method) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex method) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex method) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex method) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex method) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex method) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex method) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex method) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex method) (tvb.core.entities.model.model_datatype.DataType method) (tvb.interfaces.rest.client.tvb_client.TVBClient method) (tvb.interfaces.rest.server.facades.datatype_facade.DatatypeFacade static method) get_figure_count() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_file_data_version() (tvb.core.entities.file.files_update_manager.FilesUpdateManager method) (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager method) get_filterable_meta() (tvb.core.entities.transient.structure_entities.DataTypeMetaData class method) (tvb.core.services.project_service.ProjectService static method) get_filtered_datatypes() (in module tvb.core.entities.load) (tvb.interfaces.web.controllers.flow_controller.FlowController method) get_filtered_operations() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_filters() (tvb.adapters.analyzers.bct_adapters.BaseBCTForm static method) (tvb.adapters.analyzers.bct_adapters.BaseUnidirectedBCTForm static method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapterForm static method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapterForm static method) (tvb.adapters.analyzers.fcd_adapter.FCDAdapterForm static method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapterForm static method) (tvb.adapters.analyzers.fourier_adapter.FFTAdapterForm static method) (tvb.adapters.analyzers.ica_adapter.ICAAdapterForm static method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapterForm static method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceForm static method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceForm static method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapterForm static method) (tvb.adapters.analyzers.pca_adapter.PCAAdapterForm static method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapterForm static method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilderForm static method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreatorForm static method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreatorForm static method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivitySelectorForm static method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorForm static method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm static method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapterForm static method) (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsViewForm static method) (tvb.adapters.visualizers.brain.BrainViewerForm static method) (tvb.adapters.visualizers.brain.DualBrainViewerForm static method) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplayForm static method) (tvb.adapters.visualizers.connectivity.ConnectivityViewerForm static method) (tvb.adapters.visualizers.connectivity_edge_bundle.ConnectivityEdgeBundleForm static method) (tvb.adapters.visualizers.cross_coherence.CrossCoherenceVisualizerForm static method) (tvb.adapters.visualizers.cross_correlation.CrossCorrelationVisualizerForm static method) (tvb.adapters.visualizers.eeg_monitor.EegMonitorForm static method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumForm static method) (tvb.adapters.visualizers.histogram.HistogramViewerForm static method) (tvb.adapters.visualizers.ica.ICAForm static method) (tvb.adapters.visualizers.local_connectivity_view.LocalConnectivityViewerForm static method) (tvb.adapters.visualizers.matrix_viewer.MatrixVisualizerForm static method) (tvb.adapters.visualizers.pca.PCAForm static method) (tvb.adapters.visualizers.pearson_cross_correlation.PearsonCorrelationCoefficientVisualizerForm static method) (tvb.adapters.visualizers.pse_discrete.DiscretePSEAdapterForm static method) (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapterForm static method) (tvb.adapters.visualizers.region_volume_mapping.ConnectivityMeasureVolumeVisualizerForm static method) (tvb.adapters.visualizers.region_volume_mapping.MriVolumeVisualizerForm static method) (tvb.adapters.visualizers.region_volume_mapping.RegionVolumeMappingVisualiserForm static method) (tvb.adapters.visualizers.region_volume_mapping.VolumeVisualizerForm static method) (tvb.adapters.visualizers.sensors.SensorsViewerForm static method) (tvb.adapters.visualizers.surface_view.BaseSurfaceViewerForm static method) (tvb.adapters.visualizers.surface_view.ConnectivityMeasureOnSurfaceViewerForm static method) (tvb.adapters.visualizers.time_series.TimeSeriesForm static method) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiserForm static method) (tvb.adapters.visualizers.topographic.TopographicViewerForm static method) (tvb.adapters.visualizers.tract.TractViewerForm static method) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizerForm static method) (tvb.core.adapters.abcadapter.ABCAdapterForm static method) (tvb.core.adapters.abcuploader.ABCUploaderForm static method) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersForm static method) get_filters_for_type() (tvb.core.entities.filters.chain.FilterChain class method) get_focal_points() (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController method) get_focal_points_for_parameter() (tvb.interfaces.web.entities.context_model_parameters.SurfaceContextModelParameters method) get_form() (tvb.core.adapters.abcadapter.ABCAdapter method) get_form_class() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) (tvb.adapters.analyzers.bct_adapters.BaseUndirected method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapter method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapter method) (tvb.adapters.analyzers.fcd_adapter.FunctionalConnectivityDynamicsAdapter method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapter method) (tvb.adapters.analyzers.fourier_adapter.FourierAdapter method) (tvb.adapters.analyzers.ica_adapter.ICAAdapter method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapter method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceAdapter method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceAdapter method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapter method) (tvb.adapters.analyzers.pca_adapter.PCAAdapter method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapter method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilder method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreator method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreator method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter method) (tvb.adapters.uploaders.brco_importer.BRCOImporter method) (tvb.adapters.uploaders.connectivity_measure_importer.ConnectivityMeasureImporter method) (tvb.adapters.uploaders.csv_connectivity_importer.CSVConnectivityImporter method) (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporter method) (tvb.adapters.uploaders.gifti_timeseries_importer.GIFTITimeSeriesImporter method) (tvb.adapters.uploaders.mat_timeseries_eeg_importer.EEGRegionTimeSeriesImporter method) (tvb.adapters.uploaders.mat_timeseries_importer.RegionTimeSeriesImporter method) (tvb.adapters.uploaders.networkx_importer.NetworkxConnectivityImporter method) (tvb.adapters.uploaders.nifti_importer.NIFTIImporter method) (tvb.adapters.uploaders.obj_importer.ObjSurfaceImporter method) (tvb.adapters.uploaders.projection_matrix_importer.ProjectionMatrixSurfaceEEGImporter method) (tvb.adapters.uploaders.region_mapping_importer.RegionMappingImporter method) (tvb.adapters.uploaders.sensors_importer.SensorsImporter method) (tvb.adapters.uploaders.tract_importer.ZipTxtTractsImporter method) (tvb.adapters.uploaders.tvb_importer.TVBImporter method) (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporter method) (tvb.adapters.uploaders.zip_surface_importer.ZIPSurfaceImporter method) (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsView method) (tvb.adapters.visualizers.brain.BrainViewer method) (tvb.adapters.visualizers.brain.DualBrainViewer method) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplay method) (tvb.adapters.visualizers.connectivity.ConnectivityViewer method) (tvb.adapters.visualizers.connectivity_edge_bundle.ConnectivityEdgeBundle method) (tvb.adapters.visualizers.cross_coherence.CrossCoherenceVisualizer method) (tvb.adapters.visualizers.cross_correlation.CrossCorrelationVisualizer method) (tvb.adapters.visualizers.eeg_monitor.EegMonitor method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumDisplay method) (tvb.adapters.visualizers.histogram.HistogramViewer method) (tvb.adapters.visualizers.ica.ICA method) (tvb.adapters.visualizers.local_connectivity_view.LocalConnectivityViewer method) (tvb.adapters.visualizers.matrix_viewer.MappedArrayVisualizer method) (tvb.adapters.visualizers.pca.PCA method) (tvb.adapters.visualizers.pearson_cross_correlation.PearsonCorrelationCoefficientVisualizer method) (tvb.adapters.visualizers.pearson_edge_bundle.PearsonEdgeBundle method) (tvb.adapters.visualizers.pse_discrete.DiscretePSEAdapter method) (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapter method) (tvb.adapters.visualizers.region_volume_mapping.ConnectivityMeasureVolumeVisualizer method) (tvb.adapters.visualizers.region_volume_mapping.MappedArrayVolumeVisualizer method) (tvb.adapters.visualizers.region_volume_mapping.MriVolumeVisualizer method) (tvb.adapters.visualizers.region_volume_mapping.RegionVolumeMappingVisualiser method) (tvb.adapters.visualizers.sensors.SensorsViewer method) (tvb.adapters.visualizers.surface_view.ConnectivityMeasureOnSurfaceViewer method) (tvb.adapters.visualizers.surface_view.RegionMappingViewer method) (tvb.adapters.visualizers.surface_view.SurfaceViewer method) (tvb.adapters.visualizers.time_series.TimeSeriesDisplay method) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiser method) (tvb.adapters.visualizers.topographic.TopographicViewer method) (tvb.adapters.visualizers.tract.TractViewer method) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizer method) (tvb.core.adapters.abcadapter.ABCAdapter method) get_form_filters (tvb.core.neotraits.forms.TraitDataTypeSelectField attribute) get_form_for_coupling() (in module tvb.adapters.simulator.coupling_forms) get_form_for_equation() (in module tvb.adapters.simulator.equation_forms) get_form_for_integrator() (in module tvb.adapters.simulator.integrator_forms) get_form_for_model() (in module tvb.adapters.simulator.model_forms) get_form_for_monitor() (in module tvb.adapters.simulator.monitor_forms) get_form_for_noise() (in module tvb.adapters.simulator.noise_forms) get_fourier_data() (tvb.adapters.datatypes.h5.spectral_h5.FourierSpectrumH5 method) get_from_session() (in module tvb.interfaces.web.controllers.common) get_full_class_name() (in module tvb.core.neocom.h5) get_generic_entity() (tvb.core.entities.storage.root_dao.RootDAO method) (tvb.core.services.algorithm_service.AlgorithmService static method) get_gid_attribute() (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager method) get_greater_values_array_inds() (in module tvb.contrib.scripts.utils.computations_utils) get_group_description() (tvb.core.adapters.abcadapter.ABCAdapter class method) get_group_name() (tvb.core.adapters.abcadapter.ABCAdapter class method) get_grouped_space_labels() (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesH5 method) (tvb.adapters.visualizers.time_series.ABCSpaceDisplayer method) (tvb.datatypes.connectivity.Connectivity method) get_h5_filename() (in module tvb.core.neocom._h5loader) get_h5file_for_datatype() (tvb.core.neocom._registry.Registry method) get_h5file_for_index() (tvb.core.neocom._registry.Registry method) get_help_url() (tvb.interfaces.web.controllers.help.help_config.HelpConfig method) get_history_status() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) get_images_folder() (tvb.core.entities.file.files_helper.FilesHelper method) get_index_for_datatype() (tvb.core.neocom._registry.Registry method) get_index_for_h5file() (tvb.core.neocom._registry.Registry method) get_indices_for_labels() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_indices_for_state_variables() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_input_name() (tvb.adapters.analyzers.bct_adapters.BaseBCTForm static method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapterForm static method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapterForm static method) (tvb.adapters.analyzers.fcd_adapter.FCDAdapterForm static method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapterForm static method) (tvb.adapters.analyzers.fourier_adapter.FFTAdapterForm static method) (tvb.adapters.analyzers.ica_adapter.ICAAdapterForm static method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapterForm static method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceForm static method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceForm static method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapterForm static method) (tvb.adapters.analyzers.pca_adapter.PCAAdapterForm static method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapterForm static method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilderForm static method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreatorForm static method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreatorForm static method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivitySelectorForm static method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorForm static method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm static method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapterForm static method) (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsViewForm static method) (tvb.adapters.visualizers.brain.BrainViewerForm static method) (tvb.adapters.visualizers.brain.DualBrainViewerForm static method) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplayForm static method) (tvb.adapters.visualizers.connectivity.ConnectivityViewerForm static method) (tvb.adapters.visualizers.connectivity_edge_bundle.ConnectivityEdgeBundleForm static method) (tvb.adapters.visualizers.cross_coherence.CrossCoherenceVisualizerForm static method) (tvb.adapters.visualizers.cross_correlation.CrossCorrelationVisualizerForm static method) (tvb.adapters.visualizers.eeg_monitor.EegMonitorForm static method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumForm static method) (tvb.adapters.visualizers.histogram.HistogramViewerForm static method) (tvb.adapters.visualizers.ica.ICAForm static method) (tvb.adapters.visualizers.local_connectivity_view.LocalConnectivityViewerForm static method) (tvb.adapters.visualizers.matrix_viewer.MatrixVisualizerForm static method) (tvb.adapters.visualizers.pca.PCAForm static method) (tvb.adapters.visualizers.pearson_cross_correlation.PearsonCorrelationCoefficientVisualizerForm static method) (tvb.adapters.visualizers.pse_discrete.DiscretePSEAdapterForm static method) (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapterForm static method) (tvb.adapters.visualizers.region_volume_mapping.ConnectivityMeasureVolumeVisualizerForm static method) (tvb.adapters.visualizers.region_volume_mapping.MriVolumeVisualizerForm static method) (tvb.adapters.visualizers.region_volume_mapping.RegionVolumeMappingVisualiserForm static method) (tvb.adapters.visualizers.region_volume_mapping.VolumeVisualizerForm static method) (tvb.adapters.visualizers.sensors.SensorsViewerForm static method) (tvb.adapters.visualizers.surface_view.ConnectivityMeasureOnSurfaceViewerForm static method) (tvb.adapters.visualizers.surface_view.RegionMappingViewerForm static method) (tvb.adapters.visualizers.surface_view.SurfaceViewerForm static method) (tvb.adapters.visualizers.time_series.TimeSeriesForm static method) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiserForm static method) (tvb.adapters.visualizers.topographic.TopographicViewerForm static method) (tvb.adapters.visualizers.tract.TractViewerForm static method) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizerForm static method) (tvb.core.adapters.abcadapter.ABCAdapterForm static method) (tvb.core.adapters.abcuploader.ABCUploaderForm static method) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersForm static method) get_inputs() (tvb.core.portlets.xml_reader.XMLPortletReader method) get_inputs_dict() (tvb.core.portlets.xml_reader.PortletWrapper method) get_integrator_to_form_dict() (in module tvb.adapters.simulator.integrator_forms) get_keycloak_instance() (tvb.core.services.authorization.AuthorizationManager static method) get_known_subclasses() (tvb.basic.neotraits._declarative_base.MetaType method) get_label() (tvb.adapters.exporters.abcexporter.ABCExporter method) (tvb.adapters.exporters.tvb_export.TVBExporter method) get_labels() (tvb.adapters.datatypes.h5.sensors_h5.SensorsH5 method) get_labels_for_dimension() (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex method) get_last_data_with_uid() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_last_fragment_url() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) get_launchable_algorithms() (tvb.core.services.algorithm_service.AlgorithmService method) get_launchable_algorithms_for_datatype() (tvb.core.services.algorithm_service.AlgorithmService method) get_launchable_categories() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_library_folder() (tvb.basic.config.environment.Environment method) get_line_starts() (tvb.adapters.datatypes.h5.tracts_h5.TractsH5 method) get_lines_slice() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_link() (tvb.core.entities.storage.project_dao.CaseDAO method) get_linkable_projects() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) get_linkable_projects_for_user() (tvb.core.entities.storage.project_dao.CaseDAO method) (tvb.core.services.project_service.ProjectService static method) get_linked_datatypes_in_project() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_links_for_datatype() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_links_for_project() (tvb.core.entities.storage.project_dao.CaseDAO method) get_list_or_tuple_item_safely() (in module tvb.contrib.scripts.utils.data_structures_utils) get_locations() (tvb.adapters.datatypes.h5.sensors_h5.SensorsH5 method) get_logged_user() (in module tvb.interfaces.web.controllers.common) get_logger() (in module tvb.basic.logger.builder)

get_matlab_executable() (in module tvb.core.utils) get_max_burst_id() (tvb.core.entities.storage.burst_dao.BurstDAO method) get_measure_points_selection_gid() (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesH5 method) (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesRegionH5 method) (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesSensorsH5 method) get_members_of_project() (tvb.core.entities.storage.project_dao.CaseDAO method) get_message_from_session() (in module tvb.interfaces.web.controllers.common) get_metadata() (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager method) (tvb.core.neotraits._h5accessors.SparseMatrix method) (tvb.core.neotraits.h5.SparseMatrix method) get_metadata_param() (tvb.core.neotraits._h5core.H5File static method) (tvb.core.neotraits.h5.H5File static method) get_metric_matrix() (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapter method) (tvb.interfaces.web.controllers.burst.exploration_controller.ParameterExplorationController method) get_min_max_values() (tvb.adapters.datatypes.h5.local_connectivity_h5.LocalConnectivityH5 method) (tvb.adapters.datatypes.h5.spectral_h5.DataTypeMatrixH5 method) (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesH5 method) get_model_to_form_dict() (in module tvb.adapters.simulator.model_forms) get_modes() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_modes_by_index() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_modes_by_label() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_modes_by_slice() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_monitor_to_form_dict() (in module tvb.adapters.simulator.monitor_forms) get_monitor_to_ui_name_dict() (in module tvb.adapters.simulator.monitor_forms) get_node_matrix() (tvb.interfaces.web.controllers.burst.exploration_controller.ParameterExplorationController method) get_node_text() (tvb.core.entities.file.xml_metadata_handlers.XMLReader static method) get_non_validated_entities() (tvb.core.entities.storage.workflow_dao.WorkflowDAO method) get_nons_tag_from_node() (in module tvb.dsl.NeuroML.lems.parser.LEMS) (in module tvb.dsl_cuda.lems.parser.LEMS) get_number_of_bursts() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_number_of_split_slices() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_numeric_value() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) get_one_dimensional_list() (tvb.core.adapters.abcdisplayer.ABCDisplayer static method) get_op_thread() (in module tvb.core.services.backend_clients.hpc_scheduler_client) get_operation_by_gid() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_operation_by_id() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_operation_details() (tvb.core.services.project_service.ProjectService method) (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) get_operation_folder() (tvb.core.entities.file.files_helper.FilesHelper method) get_operation_group_by_gid() (tvb.core.services.project_service.ProjectService static method) get_operation_group_by_id() (tvb.core.services.project_service.ProjectService static method) get_operation_lazy_by_gid() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_operation_numbers() (tvb.core.entities.storage.operation_dao.OperationDAO method) (tvb.core.services.algorithm_service.AlgorithmService static method) get_operation_process_for_operation() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_operation_results() (tvb.interfaces.rest.client.tvb_client.TVBClient method) get_operation_status() (tvb.interfaces.rest.client.tvb_client.TVBClient method) (tvb.interfaces.rest.server.facades.operation_facade.OperationFacade static method) get_operationgroup_by_gid() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_operationgroup_by_id() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_operations() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_operations_for_datatype() (tvb.interfaces.rest.client.tvb_client.TVBClient method) get_operations_in_group() (tvb.core.entities.storage.operation_dao.OperationDAO method) (tvb.core.services.project_service.ProjectService static method) get_operations_in_project() (tvb.interfaces.rest.client.tvb_client.TVBClient method) get_operations_results() (tvb.interfaces.rest.server.facades.operation_facade.OperationFacade static method) get_operations_with_error_in_project() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_output() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapter method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapter method) (tvb.adapters.analyzers.fcd_adapter.FunctionalConnectivityDynamicsAdapter method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapter method) (tvb.adapters.analyzers.fourier_adapter.FourierAdapter method) (tvb.adapters.analyzers.ica_adapter.ICAAdapter method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapter method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceAdapter method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceAdapter method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapter method) (tvb.adapters.analyzers.pca_adapter.PCAAdapter method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapter method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilder method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreator method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreator method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator method) (tvb.adapters.simulator.hpc_simulator_adapter.HPCSimulatorAdapter method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter method) (tvb.adapters.uploaders.brco_importer.BRCOImporter method) (tvb.adapters.uploaders.connectivity_measure_importer.ConnectivityMeasureImporter method) (tvb.adapters.uploaders.csv_connectivity_importer.CSVConnectivityImporter method) (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporter method) (tvb.adapters.uploaders.gifti_timeseries_importer.GIFTITimeSeriesImporter method) (tvb.adapters.uploaders.mat_timeseries_importer.RegionTimeSeriesImporter method) (tvb.adapters.uploaders.networkx_importer.NetworkxConnectivityImporter method) (tvb.adapters.uploaders.nifti_importer.NIFTIImporter method) (tvb.adapters.uploaders.obj_importer.ObjSurfaceImporter method) (tvb.adapters.uploaders.projection_matrix_importer.ProjectionMatrixSurfaceEEGImporter method) (tvb.adapters.uploaders.region_mapping_importer.RegionMappingImporter method) (tvb.adapters.uploaders.sensors_importer.SensorsImporter method) (tvb.adapters.uploaders.tvb_importer.TVBImporter method) (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporter method) (tvb.adapters.uploaders.zip_surface_importer.ZIPSurfaceImporter method) (tvb.core.adapters.abcadapter.ABCAdapter method) (tvb.core.adapters.abcdisplayer.ABCDisplayer method) (tvb.interfaces.command.demos.importers.new_importer.FooDataImporter method) get_params_configurable_in_phase_plane() (tvb.adapters.simulator.form_with_ranges.FormWithRanges static method) (tvb.adapters.simulator.model_forms.Epileptor2DModelForm static method) (tvb.adapters.simulator.model_forms.EpileptorCodim3ModelForm static method) (tvb.adapters.simulator.model_forms.EpileptorCodim3SlowModModelForm static method) (tvb.adapters.simulator.model_forms.EpileptorModelForm static method) (tvb.adapters.simulator.model_forms.EpileptorRestingStateModelForm static method) (tvb.adapters.simulator.model_forms.Generic2dOscillatorModelForm static method) (tvb.adapters.simulator.model_forms.HopfieldModelForm static method) (tvb.adapters.simulator.model_forms.JansenRitModelForm static method) (tvb.adapters.simulator.model_forms.KuramotoModelForm static method) (tvb.adapters.simulator.model_forms.LarterBreakspearModelForm static method) (tvb.adapters.simulator.model_forms.LinearModelForm static method) (tvb.adapters.simulator.model_forms.ReducedSetFitzHughNagumoModelForm static method) (tvb.adapters.simulator.model_forms.ReducedSetHindmarshRoseModelForm static method) (tvb.adapters.simulator.model_forms.ReducedWongWangExcInhModelForm static method) (tvb.adapters.simulator.model_forms.ReducedWongWangModelForm static method) (tvb.adapters.simulator.model_forms.SupHopfModelForm static method) (tvb.adapters.simulator.model_forms.WilsonCowanModelForm static method) (tvb.adapters.simulator.model_forms.ZerlautAdaptationFirstOrderModelForm static method) (tvb.adapters.simulator.model_forms.ZetterbergJansenModelForm static method) get_parent_component() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) get_password_file() (tvb.core.services.encryption_handler.EncryptionHandler method) get_path_to_encrypt() (tvb.core.adapters.abcuploader.ABCUploader static method) get_pick_triangles_slice() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_pick_vertex_normals_slice() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_pick_vertices_slice() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_portlet() (tvb.core.entities.model.model_burst.TabConfiguration method) get_portlet_by_id() (tvb.core.entities.storage.workflow_dao.WorkflowDAO method) get_portlet_by_identifier() (tvb.core.entities.storage.workflow_dao.WorkflowDAO method) get_previews() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_project_by_gid() (tvb.core.entities.storage.project_dao.CaseDAO method) get_project_by_id() (tvb.core.entities.storage.project_dao.CaseDAO method) get_project_disk_size() (tvb.core.entities.storage.project_dao.CaseDAO method) get_project_folder() (tvb.core.entities.file.files_helper.FilesHelper method) get_project_for_operation() (tvb.core.entities.storage.project_dao.CaseDAO method) get_project_lazy_by_gid() (tvb.core.entities.storage.project_dao.CaseDAO method) get_project_list() (tvb.interfaces.rest.client.tvb_client.TVBClient method) get_project_meta_file_path() (tvb.core.entities.file.files_helper.FilesHelper method) get_project_operations() (tvb.interfaces.rest.server.facades.project_facade.ProjectFacade method) get_project_structure() (tvb.core.services.project_service.ProjectService method) get_project_structure_grouping() (tvb.core.entities.model.model_project.User method) (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) get_project_uploader_overlay() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) get_projects_for_user() (tvb.core.entities.storage.project_dao.CaseDAO method) get_pse_filters() (tvb.interfaces.web.controllers.flow_controller.FlowController method) get_python_filter_equivalent() (tvb.core.entities.filters.chain.FilterChain method) get_range1_key() (tvb.adapters.visualizers.pse.PSEGroupModel method) get_range1_label() (tvb.adapters.visualizers.pse.PSEModel method) get_range2_key() (tvb.adapters.visualizers.pse.PSEGroupModel method) get_range2_label() (tvb.adapters.visualizers.pse.PSEModel method) get_range_parameters() (tvb.adapters.simulator.form_with_ranges.FormWithRanges method) (tvb.adapters.simulator.noise_forms.AdditiveNoiseForm method) get_range_values() (tvb.core.entities.transient.range_parameter.RangeParameter method) get_raw_categories() (tvb.core.entities.storage.operation_dao.OperationDAO method) (tvb.core.services.algorithm_service.AlgorithmService static method) get_region_labels() (tvb.adapters.datatypes.h5.connectivity_h5.ConnectivityH5 method) get_region_mapping_slice() (tvb.adapters.datatypes.h5.region_mapping_h5.RegionMappingH5 method) get_regions_inds_by_labels() (tvb.contrib.scripts.datatypes.connectivity.Connectivity method) get_remover() (in module tvb.core.removers_factory) get_rendering_dict() (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreatorForm method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivitySelectorForm method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorForm method) (tvb.adapters.creators.stimulus_creator.StimulusRegionSelectorForm method) (tvb.adapters.creators.stimulus_creator.StimulusSurfaceSelectorForm method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm method) get_required_datatype() (tvb.adapters.analyzers.bct_adapters.BaseBCTForm static method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapterForm static method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapterForm static method) (tvb.adapters.analyzers.fcd_adapter.FCDAdapterForm static method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapterForm static method) (tvb.adapters.analyzers.fourier_adapter.FFTAdapterForm static method) (tvb.adapters.analyzers.ica_adapter.ICAAdapterForm static method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapterForm static method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceForm static method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceForm static method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapterForm static method) (tvb.adapters.analyzers.pca_adapter.PCAAdapterForm static method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapterForm static method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilderForm static method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreatorForm static method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreatorForm static method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivitySelectorForm static method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorForm static method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm static method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapterForm static method) (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsViewForm static method) (tvb.adapters.visualizers.brain.BrainViewerForm static method) (tvb.adapters.visualizers.brain.DualBrainViewerForm static method) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplayForm static method) (tvb.adapters.visualizers.connectivity.ConnectivityViewerForm static method) (tvb.adapters.visualizers.connectivity_edge_bundle.ConnectivityEdgeBundleForm static method) (tvb.adapters.visualizers.cross_coherence.CrossCoherenceVisualizerForm static method) (tvb.adapters.visualizers.cross_correlation.CrossCorrelationVisualizerForm static method) (tvb.adapters.visualizers.eeg_monitor.EegMonitorForm static method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumForm static method) (tvb.adapters.visualizers.histogram.HistogramViewerForm static method) (tvb.adapters.visualizers.ica.ICAForm static method) (tvb.adapters.visualizers.local_connectivity_view.LocalConnectivityViewerForm static method) (tvb.adapters.visualizers.matrix_viewer.MatrixVisualizerForm static method) (tvb.adapters.visualizers.pca.PCAForm static method) (tvb.adapters.visualizers.pearson_cross_correlation.PearsonCorrelationCoefficientVisualizerForm static method) (tvb.adapters.visualizers.pse_discrete.DiscretePSEAdapterForm static method) (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapterForm static method) (tvb.adapters.visualizers.region_volume_mapping.ConnectivityMeasureVolumeVisualizerForm static method) (tvb.adapters.visualizers.region_volume_mapping.MriVolumeVisualizerForm static method) (tvb.adapters.visualizers.region_volume_mapping.RegionVolumeMappingVisualiserForm static method) (tvb.adapters.visualizers.region_volume_mapping.VolumeVisualizerForm static method) (tvb.adapters.visualizers.sensors.SensorsViewerForm static method) (tvb.adapters.visualizers.surface_view.ConnectivityMeasureOnSurfaceViewerForm static method) (tvb.adapters.visualizers.surface_view.RegionMappingViewerForm static method) (tvb.adapters.visualizers.surface_view.SurfaceViewerForm static method) (tvb.adapters.visualizers.time_series.TimeSeriesForm static method) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiserForm static method) (tvb.adapters.visualizers.topographic.TopographicViewerForm static method) (tvb.adapters.visualizers.tract.TractViewerForm static method) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizerForm static method) (tvb.core.adapters.abcadapter.ABCAdapterForm static method) (tvb.core.adapters.abcuploader.ABCUploaderForm static method) (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersForm static method) get_required_disk_size() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapter method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapter method) (tvb.adapters.analyzers.fcd_adapter.FunctionalConnectivityDynamicsAdapter method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapter method) (tvb.adapters.analyzers.fourier_adapter.FourierAdapter method) (tvb.adapters.analyzers.ica_adapter.ICAAdapter method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapter method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceAdapter method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceAdapter method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapter method) (tvb.adapters.analyzers.pca_adapter.PCAAdapter method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapter method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilder method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreator method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreator method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter method) (tvb.core.adapters.abcadapter.ABCAdapter method) (tvb.core.adapters.abcdisplayer.ABCDisplayer method) (tvb.core.adapters.abcuploader.ABCUploader method) get_required_memory_size() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapter method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapter method) (tvb.adapters.analyzers.fcd_adapter.FunctionalConnectivityDynamicsAdapter method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapter method) (tvb.adapters.analyzers.fourier_adapter.FourierAdapter method) (tvb.adapters.analyzers.ica_adapter.ICAAdapter method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapter method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceAdapter method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceAdapter method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapter method) (tvb.adapters.analyzers.pca_adapter.PCAAdapter method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapter method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilder method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreator method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreator method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter method) (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsView method) (tvb.adapters.visualizers.brain.BrainViewer method) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplay method) (tvb.adapters.visualizers.connectivity.ConnectivityViewer method) (tvb.adapters.visualizers.connectivity_edge_bundle.ConnectivityEdgeBundle method) (tvb.adapters.visualizers.eeg_monitor.EegMonitor method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumDisplay method) (tvb.adapters.visualizers.histogram.HistogramViewer method) (tvb.adapters.visualizers.local_connectivity_view.LocalConnectivityViewer method) (tvb.adapters.visualizers.matrix_viewer.ABCMappedArraySVGVisualizer method) (tvb.adapters.visualizers.pca.PCA method) (tvb.adapters.visualizers.pearson_edge_bundle.PearsonEdgeBundle method) (tvb.adapters.visualizers.pse_discrete.DiscretePSEAdapter method) (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapter method) (tvb.adapters.visualizers.region_volume_mapping.MriVolumeVisualizer method) (tvb.adapters.visualizers.sensors.SensorsViewer method) (tvb.adapters.visualizers.surface_view.SurfaceViewer method) (tvb.adapters.visualizers.time_series.TimeSeriesDisplay method) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiser method) (tvb.adapters.visualizers.topographic.TopographicViewer method) (tvb.adapters.visualizers.tract.TractViewer method) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizer method) (tvb.core.adapters.abcadapter.ABCAdapter method) (tvb.core.adapters.abcuploader.ABCUploader method) get_results_for_operation() (tvb.core.entities.storage.operation_dao.OperationDAO method) (tvb.core.services.project_service.ProjectService static method) get_sample_window() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_selections_for_project() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.core.services.algorithm_service.AlgorithmService static method) get_sensors_inds_by_elec_labels() (tvb.contrib.scripts.datatypes.sensors.SensorsInternal method) get_sensors_inds_by_sensors_labels() (tvb.contrib.scripts.datatypes.sensors.Sensors method) get_series_array_discrete() (tvb.interfaces.web.controllers.burst.exploration_controller.ParameterExplorationController method) get_series_data() (tvb.datatypes.equations.Equation method) get_series_json() (tvb.interfaces.web.controllers.spatial.base_spatio_temporal_controller.SpatioTemporalController static method) (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController static method) get_simple_adapter_interface() (tvb.interfaces.web.controllers.flow_controller.FlowController method) get_slice_vertex_boundaries() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_slices_to_hemisphere_mask() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_source() (tvb.contrib.scripts.datatypes.time_series.TimeSeriesBrain method) get_space_labels() (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesH5 method) (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesSurfaceH5 method) (tvb.adapters.visualizers.time_series.ABCSpaceDisplayer method) get_spatial_equation_chart() (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController method) get_spectrum_data() (tvb.adapters.datatypes.h5.spectral_h5.ComplexCoherenceSpectrumH5 method) get_sql_filter_equivalent() (tvb.core.entities.filters.chain.FilterChain method) get_state() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) get_state_variable() (tvb.datatypes.time_series.TimeSeries method) get_state_variables() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_state_variables_by_index() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_state_variables_by_label() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_state_variables_by_slice() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_stimulus_chunk() (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController method) get_stored_pse_filters() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.core.services.algorithm_service.AlgorithmService static method) get_subform_for_field_value() (tvb.adapters.simulator.subform_helper.SubformHelper static method) get_subform_key() (tvb.adapters.simulator.equation_forms.EquationForm method) (tvb.adapters.simulator.integrator_forms.IntegratorForm method) (tvb.adapters.simulator.noise_forms.NoiseForm method) (tvb.core.neotraits.forms.Form method) get_subspace() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_subspace_by_index() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) (tvb.datatypes.time_series.TimeSeries method) get_subspace_by_label() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_subspace_by_labels() (tvb.datatypes.time_series.TimeSeries method) get_subspace_by_slice() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_subtype_attr() (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex method) (tvb.adapters.datatypes.db.sensors.SensorsIndex method) (tvb.adapters.datatypes.db.surface.SurfaceIndex method) (tvb.core.neotraits.db.HasTraitsIndex method) get_summary_for_group() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_supported_types() (tvb.adapters.exporters.abcexporter.ABCExporter method) (tvb.adapters.exporters.tvb_export.TVBExporter method) get_system_user() (tvb.core.entities.storage.project_dao.CaseDAO method) get_template_for_adapter() (tvb.interfaces.web.controllers.flow_controller.FlowController method) get_temporal_equation_chart() (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController method) get_time_series_by_gid() (tvb.core.entities.storage.root_dao.RootDAO method) get_time_window() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_time_window_by_units() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_times() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_times_by_index() (tvb.contrib.scripts.datatypes.time_series.TimeSeries method) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries method) get_tract() (tvb.adapters.datatypes.h5.tracts_h5.TractsH5 method) get_traited_datatype() (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapterForm method) (tvb.adapters.analyzers.fcd_adapter.FCDAdapterForm method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapterForm method) (tvb.adapters.analyzers.fourier_adapter.FFTAdapterForm method) (tvb.adapters.analyzers.ica_adapter.ICAAdapterForm method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceForm method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceForm method) (tvb.adapters.analyzers.pca_adapter.PCAAdapterForm method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapterForm method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreatorForm method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapterForm method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumForm method) (tvb.core.adapters.abcadapter.ABCAdapterForm method) get_traited_equation() (tvb.adapters.simulator.equation_forms.AlphaEquationForm method) (tvb.adapters.simulator.equation_forms.CosineEquationForm method) (tvb.adapters.simulator.equation_forms.DoubleExponentialEquationForm method) (tvb.adapters.simulator.equation_forms.DoubleGaussianEquationForm method) (tvb.adapters.simulator.equation_forms.EquationForm method) (tvb.adapters.simulator.equation_forms.FirstOrderVolterraEquationForm method) (tvb.adapters.simulator.equation_forms.GammaEquationForm method) (tvb.adapters.simulator.equation_forms.GaussianEquationForm method) (tvb.adapters.simulator.equation_forms.GeneralizedSigmoidEquationForm method) (tvb.adapters.simulator.equation_forms.LinearEquationForm method) (tvb.adapters.simulator.equation_forms.MixtureOfGammasEquationForm method) (tvb.adapters.simulator.equation_forms.PulseTrainEquationForm method) (tvb.adapters.simulator.equation_forms.SigmoidEquationForm method) (tvb.adapters.simulator.equation_forms.SinusoidEquationForm method) get_triangle_normals() (tvb.contrib.scripts.datatypes.surface.Surface method) get_triangles_mapping() (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsView method) get_triangles_slice() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_TVB_proj_type() (in module tvb.contrib.scripts.datatypes.projections) get_ui_description() (tvb.core.adapters.abcadapter.ABCAdapter class method) get_ui_fields() (tvb.core.entities.transient.context_overlay.CommonDetails method) get_ui_message() (tvb.interfaces.web.controllers.spatial.base_spatio_temporal_controller.SpatioTemporalController static method) get_ui_name() (tvb.core.adapters.abcadapter.ABCAdapter class method) get_ui_name_for_equation() (in module tvb.adapters.simulator.equation_forms) get_ui_name_to_coupling_dict() (in module tvb.adapters.simulator.coupling_forms) get_ui_name_to_equation_dict() (in module tvb.adapters.simulator.subforms_mapping) get_ui_name_to_integrator_dict() (in module tvb.adapters.simulator.subforms_mapping) get_ui_name_to_model() (in module tvb.adapters.simulator.model_forms) get_ui_name_to_monitor_dict() (in module tvb.adapters.simulator.monitor_forms) get_ui_name_to_monitor_equation_dict() (in module tvb.adapters.simulator.equation_forms) get_ui_name_to_noise_dict() (in module tvb.adapters.simulator.subforms_mapping) get_ui_subsection() (tvb.core.adapters.abcadapter.ABCAdapter class method) get_unique_file_name() (in module tvb.core.utils) get_update_scripts() (tvb.core.code_versions.base_classes.UpdateManager method) get_upload_algorithms() (tvb.core.services.algorithm_service.AlgorithmService static method) get_upload_information() (tvb.adapters.uploaders.brco_importer.BRCOImporterForm static method) (tvb.adapters.uploaders.connectivity_measure_importer.ConnectivityMeasureImporterForm static method) (tvb.adapters.uploaders.csv_connectivity_importer.CSVConnectivityImporterForm static method) (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporterForm static method) (tvb.adapters.uploaders.gifti_timeseries_importer.GIFTITimeSeriesImporterForm static method) (tvb.adapters.uploaders.mat_timeseries_importer.RegionMatTimeSeriesImporterForm static method) (tvb.adapters.uploaders.networkx_importer.NetworkxConnectivityImporterForm static method) (tvb.adapters.uploaders.nifti_importer.NIFTIImporterForm static method) (tvb.adapters.uploaders.obj_importer.ObjSurfaceImporterForm static method) (tvb.adapters.uploaders.projection_matrix_importer.ProjectionMatrixImporterForm static method) (tvb.adapters.uploaders.region_mapping_importer.RegionMappingImporterForm static method) (tvb.adapters.uploaders.sensors_importer.SensorsImporterForm static method) (tvb.adapters.uploaders.tract_importer.TrackImporterForm static method) (tvb.adapters.uploaders.tvb_importer.TVBImporterForm static method) (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporterForm static method) (tvb.adapters.uploaders.zip_surface_importer.ZIPSurfaceImporterForm static method) (tvb.core.adapters.abcuploader.ABCUploader static method) get_upload_input_tree() (tvb.interfaces.command.demos.importers.new_importer.FooDataImporter method) get_upload_overlay() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) get_uploader_categories() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_url_adapter() (tvb.interfaces.web.controllers.base_controller.BaseController static method) get_url_for_region_boundaries() (tvb.adapters.visualizers.surface_view.SurfaceURLGenerator static method) get_urls_for_pick_rendering() (tvb.adapters.visualizers.surface_view.SurfaceURLGenerator static method) get_urls_for_rendering() (tvb.adapters.datatypes.h5.tracts_h5.TractsH5 method) (tvb.adapters.visualizers.surface_view.SurfaceURLGenerator static method) get_user_by_email() (tvb.core.entities.storage.project_dao.CaseDAO method) get_user_by_gid() (tvb.core.entities.storage.project_dao.CaseDAO method) (tvb.core.services.user_service.UserService static method) get_user_by_id() (tvb.core.entities.storage.project_dao.CaseDAO method) (tvb.core.services.user_service.UserService static method) get_user_by_name() (tvb.core.entities.storage.project_dao.CaseDAO method) (tvb.core.services.user_service.UserService static method) get_user_for_datatype() (tvb.core.entities.storage.project_dao.CaseDAO method) get_users() (tvb.interfaces.rest.client.tvb_client.TVBClient method) (tvb.interfaces.rest.server.facades.user_facade.UserFacade static method) get_users_for_project() (tvb.core.services.user_service.UserService method) get_val_key_for_first_keymatch_in_dict() (in module tvb.contrib.scripts.utils.data_structures_utils) get_values_of_datatype() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) get_vertex_areas() (tvb.contrib.scripts.datatypes.surface.Surface method) get_vertex_normals() (tvb.contrib.scripts.datatypes.surface.Surface method) get_vertex_normals_slice() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_vertices() (tvb.adapters.datatypes.h5.tracts_h5.TractsH5 method) get_vertices_slice() (tvb.adapters.datatypes.h5.surface_h5.SurfaceH5 method) get_view_model() (tvb.adapters.analyzers.bct_adapters.BaseBCTForm static method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapterForm static method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapterForm static method) (tvb.adapters.analyzers.fcd_adapter.FCDAdapterForm static method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapterForm static method) (tvb.adapters.analyzers.fourier_adapter.FFTAdapterForm static method) (tvb.adapters.analyzers.ica_adapter.ICAAdapterForm static method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapterForm static method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceForm static method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceForm static method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapterForm static method) (tvb.adapters.analyzers.pca_adapter.PCAAdapterForm static method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapterForm static method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilderForm static method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreatorForm static method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreatorForm static method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreatorForm static method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreatorForm static method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapterForm static method) (tvb.adapters.uploaders.brco_importer.BRCOImporterForm static method) (tvb.adapters.uploaders.connectivity_measure_importer.ConnectivityMeasureImporterForm static method) (tvb.adapters.uploaders.csv_connectivity_importer.CSVConnectivityImporterForm static method) (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporterForm static method) (tvb.adapters.uploaders.gifti_timeseries_importer.GIFTITimeSeriesImporterForm static method) (tvb.adapters.uploaders.mat_timeseries_eeg_importer.EEGRegionMatTimeSeriesImporterForm static method) (tvb.adapters.uploaders.mat_timeseries_importer.RegionMatTimeSeriesImporterForm static method) (tvb.adapters.uploaders.networkx_importer.NetworkxConnectivityImporterForm static method) (tvb.adapters.uploaders.nifti_importer.NIFTIImporterForm static method) (tvb.adapters.uploaders.obj_importer.ObjSurfaceImporterForm static method) (tvb.adapters.uploaders.projection_matrix_importer.ProjectionMatrixImporterForm static method) (tvb.adapters.uploaders.region_mapping_importer.RegionMappingImporterForm static method) (tvb.adapters.uploaders.sensors_importer.SensorsImporterForm static method) (tvb.adapters.uploaders.tract_importer.TrackImporterForm static method) (tvb.adapters.uploaders.tvb_importer.TVBImporterForm static method) (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporterForm static method) (tvb.adapters.uploaders.zip_surface_importer.ZIPSurfaceImporterForm static method) (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsViewForm static method) (tvb.adapters.visualizers.brain.BrainViewerForm static method) (tvb.adapters.visualizers.brain.DualBrainViewerForm static method) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplayForm static method) (tvb.adapters.visualizers.connectivity.ConnectivityViewerForm static method) (tvb.adapters.visualizers.connectivity_edge_bundle.ConnectivityEdgeBundleForm static method) (tvb.adapters.visualizers.cross_coherence.CrossCoherenceVisualizerForm static method) (tvb.adapters.visualizers.cross_correlation.CrossCorrelationVisualizerForm static method) (tvb.adapters.visualizers.eeg_monitor.EegMonitorForm static method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumForm static method) (tvb.adapters.visualizers.histogram.HistogramViewerForm static method) (tvb.adapters.visualizers.ica.ICAForm static method) (tvb.adapters.visualizers.local_connectivity_view.LocalConnectivityViewerForm static method) (tvb.adapters.visualizers.matrix_viewer.MatrixVisualizerForm static method) (tvb.adapters.visualizers.pca.PCAForm static method) (tvb.adapters.visualizers.pearson_cross_correlation.PearsonCorrelationCoefficientVisualizerForm static method) (tvb.adapters.visualizers.pse_discrete.DiscretePSEAdapterForm static method) (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapterForm static method) (tvb.adapters.visualizers.region_volume_mapping.ConnectivityMeasureVolumeVisualizerForm static method) (tvb.adapters.visualizers.region_volume_mapping.MriVolumeVisualizerForm static method) (tvb.adapters.visualizers.region_volume_mapping.RegionVolumeMappingVisualiserForm static method) (tvb.adapters.visualizers.region_volume_mapping.VolumeVisualizerForm static method) (tvb.adapters.visualizers.sensors.SensorsViewerForm static method) (tvb.adapters.visualizers.surface_view.ConnectivityMeasureOnSurfaceViewerForm static method) (tvb.adapters.visualizers.surface_view.RegionMappingViewerForm static method) (tvb.adapters.visualizers.surface_view.SurfaceViewerForm static method) (tvb.adapters.visualizers.time_series.TimeSeriesForm static method) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiserForm static method) (tvb.adapters.visualizers.topographic.TopographicViewerForm static method) (tvb.adapters.visualizers.tract.TractViewerForm static method) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizerForm static method) (tvb.core.adapters.abcadapter.ABCAdapterForm static method) get_view_model_class() (tvb.core.adapters.abcadapter.ABCAdapter method) get_view_model_from_session() (tvb.interfaces.web.entities.context_selected_adapter.SelectedAdapterContext method) get_viewer_color_scheme() (tvb.interfaces.web.controllers.users_controller.UserController method) get_viewers_color_scheme() (tvb.core.entities.model.model_project.User method) get_visualisers_categories() (tvb.core.entities.storage.operation_dao.OperationDAO method) get_visualisers_category() (tvb.core.services.algorithm_service.AlgorithmService static method) get_visualizers_for_group() (tvb.core.services.algorithm_service.AlgorithmService method) get_volume_slice() (tvb.adapters.datatypes.h5.structural_h5.VolumetricDataMixin method) get_volume_view() (tvb.adapters.datatypes.h5.structural_h5.VolumetricDataMixin method) (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesVolumeH5 method) get_voxel_time_series() (tvb.adapters.datatypes.h5.time_series_h5.TimeSeriesVolumeH5 method) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiser method) get_x_axis_range() (tvb.interfaces.web.controllers.spatial.base_spatio_temporal_controller.SpatioTemporalController method) getadapterinterface() (tvb.interfaces.web.controllers.flow_controller.FlowController method) getmemberspage() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) gfun() (tvb.simulator.noise.Additive method) (tvb.simulator.noise.Multiplicative method) (tvb.simulator.noise.Noise method) gGABA_e (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) gGABA_i (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) gid (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.basic.neotraits._core.HasTraits attribute) (tvb.basic.neotraits.api.HasTraits attribute) (tvb.core.entities.model.model_burst.BurstConfiguration attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) (tvb.core.entities.model.model_operation.Operation attribute) (tvb.core.entities.model.model_operation.OperationGroup attribute) (tvb.core.entities.model.model_project.Project attribute) (tvb.core.entities.model.model_project.User attribute) (tvb.core.entities.transient.structure_entities.GenericMetaData attribute) (tvb.core.neotraits.db.HasTraitsIndex attribute) (tvb.simulator.simulator.Simulator attribute) GID_FIELD (tvb.adapters.simulator.simulator_fragments.SimulatorPSERangeFragment attribute) GIFTIParser (class in tvb.adapters.uploaders.gifti.parser) GIFTISurfaceImporter (class in tvb.adapters.uploaders.gifti_surface_importer) GIFTISurfaceImporterForm (class in tvb.adapters.uploaders.gifti_surface_importer) GIFTISurfaceImporterModel (class in tvb.adapters.uploaders.gifti_surface_importer) GIFTITimeSeriesImporter (class in tvb.adapters.uploaders.gifti_timeseries_importer) GIFTITimeSeriesImporterForm (class in tvb.adapters.uploaders.gifti_timeseries_importer) GIFTITimeSeriesImporterModel (class in tvb.adapters.uploaders.gifti_timeseries_importer) gK (tvb.contrib.simulator.models.larter.Larter attribute) (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.contrib.simulator.models.morris_lecar.MorrisLecar attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) gL (tvb.contrib.simulator.models.larter.Larter attribute) (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.contrib.simulator.models.morris_lecar.MorrisLecar attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) GlobalAverage (class in tvb.simulator.monitors) GlobalAverageMonitorForm (class in tvb.adapters.simulator.monitor_forms) GlobalAverageViewModel (class in tvb.core.entities.file.simulator.view_model) globalT (tvb.simulator.coupling.PreSigmoidal attribute) GlobalVariance (class in tvb.analyzers.metric_variance_global) gm_e (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) gm_i (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) gNa (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) gNMDA_e (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) gNMDA_i (tvb.contrib.simulator.models.brunel_wang.BrunelWang attribute) good_history_shape (tvb.simulator.simulator.Simulator attribute) graph_changed() (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController method) group (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) group_description (tvb.core.entities.model.model_operation.Algorithm attribute) group_name (tvb.core.entities.model.model_operation.Algorithm attribute) group_noise_array_by_state_var() (tvb.interfaces.web.controllers.burst.noise_configuration_controller.NoiseConfigurationController static method) group_operation_launch() (tvb.core.services.operation_service.OperationService method) group_parameter_values_by_name() (tvb.core.services.burst_config_serialization.SerializationManager static method) group_sensors_to_electrodes() (tvb.contrib.scripts.datatypes.sensors.SensorsInternal method) (tvb.datatypes.sensors.SensorsInternal static method) grouped_electrodes (tvb.datatypes.sensors.SensorsInternal attribute) gumbel() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c)

H

H (tvb.simulator.coupling.PreSigmoidal attribute) h5_class_from_file() (tvb.core.neotraits._h5core.H5File static method) (tvb.core.neotraits.h5.H5File static method) H5_FILE (tvb.core.adapters.abcdisplayer.URLGenerator attribute) h5_file_for_index() (in module tvb.core.neocom.h5) H5File (class in tvb.core.neotraits._h5core) (class in tvb.core.neotraits.h5) H5Reader (class in tvb.basic.readers) h_e_rest (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) h_e_rev (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) h_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) h_i_rest (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) h_i_rev (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) hamming() (in module tvb.analyzers.node_coherence) handle_error() (in module tvb.interfaces.web.controllers.decorators) (tvb.interfaces.rest.server.rest_api.RestApi method) handle_hpc_status_changed() (tvb.core.services.hpc_operation_service.HPCOperationService static method) handle_response() (in module tvb.interfaces.rest.client.client_decorators) has_access() (tvb.interfaces.rest.server.access_permissions.permissions.ResourceAccessPermission method) has_children (tvb.core.entities.transient.structure_entities.StructureNode attribute) has_content() (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral method) (tvb.dsl.NeuroML.lems.model.dynamics.Dynamics method) (tvb.dsl.NeuroML.lems.model.structure.Structure method) (tvb.dsl_cuda.lems.model.dynamics.Behavioral method) (tvb.dsl_cuda.lems.model.dynamics.Dynamics method) (tvb.dsl_cuda.lems.model.structure.Structure method) has_cortical_mask (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) has_error_message() (in module tvb.interfaces.web.controllers.common) has_file_like() (tvb.basic.readers.ZipReader method) has_finished (tvb.core.entities.model.model_operation.Operation attribute) has_finished() (in module tvb.core.entities.model.model_operation) has_hemispheres_mask (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) has_nan (tvb.adapters.visualizers.eeg_monitor.EegMonitor attribute) has_orientation (tvb.datatypes.sensors.Sensors attribute) (tvb.datatypes.sensors.SensorsEEG attribute) (tvb.datatypes.sensors.SensorsMEG attribute) has_surface_mapping (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) has_volume_mapping (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) hash_password() (in module tvb.core.utils) HasTraits (class in tvb.basic.neotraits._core) (class in tvb.basic.neotraits.api) HasTraitsIndex (class in tvb.core.neotraits.db), [1] HAVE_STATE_VARIABLES (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter attribute) HDF5StorageManager (class in tvb.core.entities.file.hdf5_storage_manager) HDF5StorageManager.H5pyStorageBuffer (class in tvb.core.entities.file.hdf5_storage_manager) He (tvb.contrib.simulator.models.jansen_rit_david.JansenRitDavid attribute) (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) Head (class in tvb.contrib.scripts.datatypes.head) HeadService (class in tvb.contrib.scripts.service.head_service) heaviside() (in module tvb.simulator.common) Heke (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) HELP_PAGE_PATH (tvb.interfaces.web.controllers.help.help_config.HelpConfig attribute) HelpConfig (class in tvb.interfaces.web.controllers.help.help_config) HelpController (class in tvb.interfaces.web.controllers.help.help_controller) HEMISPHERE_INFO (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporter attribute) hemisphere_mask (tvb.datatypes.surfaces.Surface attribute)

hemisphere_order_indices (tvb.datatypes.connectivity.Connectivity attribute) HEMISPHERE_RIGHT (tvb.adapters.uploaders.networkx_connectivity.parser.NetworkxParser attribute) hemispheres (tvb.datatypes.connectivity.Connectivity attribute) HEMISPHERES (tvb.simulator.monitors.SpatialAverage attribute) hemodynamic_response_function (tvb.simulator.monitors.Bold attribute) HeunDeterministic (class in tvb.simulator.integrators) HeunDeterministicIntegratorForm (class in tvb.adapters.simulator.integrator_forms) HeunDeterministicViewModel (class in tvb.core.entities.file.simulator.view_model) HeunStochastic (class in tvb.simulator.integrators) HeunStochasticIntegratorForm (class in tvb.adapters.simulator.integrator_forms) HeunStochasticViewModel (class in tvb.core.entities.file.simulator.view_model) Hi (tvb.contrib.simulator.models.jansen_rit_david.JansenRitDavid attribute) (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) HI_FIELD (tvb.adapters.simulator.simulator_fragments.SimulatorPSERangeFragment attribute) hide_launch_and_setup_pse_button (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) hide_previous_button (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) Hiki (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) HindmarshRose (class in tvb.contrib.simulator.models.hindmarsh_rose) HistogramViewer (class in tvb.adapters.visualizers.histogram) HistogramViewerForm (class in tvb.adapters.visualizers.histogram) HistogramViewerModel (class in tvb.adapters.visualizers.histogram) history (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) (tvb.simulator.simulator.Simulator attribute) history_gid (tvb.core.entities.file.simulator.view_model.SimulatorAdapterModel attribute) HMJEpileptor (class in tvb.contrib.simulator.models.epileptor) HOME_FOLDER_MOUNT (tvb.core.services.backend_clients.hpc_scheduler_client.HPCSchedulerClient attribute) Hopfield (class in tvb.simulator.models.hopfield) HOPFIELD (tvb.simulator.models.ModelsEnum attribute) HopfieldModelForm (class in tvb.adapters.simulator.model_forms) horizon (tvb.simulator.common.Buffer attribute) HPC_LAUNCHER_SH_SCRIPT (tvb.basic.config.settings.HPCSettings attribute) HPCController (class in tvb.interfaces.web.controllers.hpc_controller) HPCJobStatus (class in tvb.core.services.backend_clients.hpc_scheduler_client) HPCOperationService (class in tvb.core.services.hpc_operation_service) HPCOperationThread (class in tvb.core.services.backend_clients.hpc_scheduler_client) HPCSchedulerClient (class in tvb.core.services.backend_clients.hpc_scheduler_client) HPCSettings (class in tvb.basic.config.settings) HPCSimulatorAdapter (class in tvb.adapters.simulator.hpc_simulator_adapter) HPCTimeseriesMetricsAdapter (class in tvb.adapters.simulator.hpc_simulator_adapter) hrf_kernel (tvb.simulator.monitors.Bold attribute) hrf_length (tvb.simulator.monitors.Bold attribute) HRFKernelEquation (class in tvb.datatypes.equations) HyperbolicTangent (class in tvb.simulator.coupling) HyperbolicTangentCouplingForm (class in tvb.adapters.simulator.coupling_forms) hypergeometric() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c)

I

i (tvb.dsl.NeuroML.lems.model.fundamental.Dimension attribute) (tvb.dsl_cuda.lems.model.fundamental.Dimension attribute) I (tvb.simulator.models.oscillator.Generic2dOscillator attribute) i_mode (tvb.adapters.visualizers.ica.ICAModel attribute) I_o (tvb.contrib.simulator.models.wong_wang.WongWang attribute) (tvb.simulator.models.wong_wang.ReducedWongWang attribute) i_svar (tvb.adapters.visualizers.ica.ICAModel attribute) ICA (class in tvb.adapters.visualizers.ica) ICAAdapter (class in tvb.adapters.analyzers.ica_adapter) ICAAdapterForm (class in tvb.adapters.analyzers.ica_adapter) ICAAdapterModel (class in tvb.adapters.analyzers.ica_adapter) ICAForm (class in tvb.adapters.visualizers.ica) ICAModel (class in tvb.adapters.visualizers.ica) id (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.model.model_burst.BurstConfiguration attribute) (tvb.core.entities.model.model_burst.Dynamic attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) (tvb.core.entities.model.model_datatype.Links attribute) (tvb.core.entities.model.model_datatype.MeasurePointsSelection attribute) (tvb.core.entities.model.model_datatype.StoredPSEFilter attribute) (tvb.core.entities.model.model_operation.Algorithm attribute) (tvb.core.entities.model.model_operation.AlgorithmCategory attribute) (tvb.core.entities.model.model_operation.Operation attribute) (tvb.core.entities.model.model_operation.OperationGroup attribute) (tvb.core.entities.model.model_operation.OperationProcessIdentifier attribute) (tvb.core.entities.model.model_operation.ResultFigure attribute) (tvb.core.entities.model.model_project.Project attribute) (tvb.core.entities.model.model_project.User attribute) (tvb.core.entities.model.model_project.User_to_Project attribute) (tvb.core.entities.model.model_workflow.Portlet attribute) (tvb.core.neotraits.db.HasTraitsIndex attribute) (tvb.core.neotraits.forms.Option attribute) (tvb.dsl.NeuroML.lems.model.component.Component attribute) (tvb.dsl.NeuroML.lems.model.component.FatComponent attribute) (tvb.dsl.NeuroML.lems.model.simulation.EventRecord attribute) (tvb.dsl.NeuroML.lems.model.simulation.Record attribute) (tvb.dsl_cuda.lems.model.component.Component attribute) (tvb.dsl_cuda.lems.model.component.FatComponent attribute) (tvb.dsl_cuda.lems.model.simulation.EventRecord attribute) (tvb.dsl_cuda.lems.model.simulation.Record attribute) id_counter (tvb.dsl.NeuroML.lems.parser.LEMS.LEMSFileParser attribute) (tvb.dsl_cuda.lems.parser.LEMS.LEMSFileParser attribute) idelays (tvb.datatypes.connectivity.Connectivity attribute) Identity (class in tvb.simulator.integrators) IdentityIntegratorForm (class in tvb.adapters.simulator.integrator_forms) IdentityViewModel (class in tvb.core.entities.file.simulator.view_model) IE_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) iEEG (class in tvb.simulator.monitors) iEEGMonitorForm (class in tvb.adapters.simulator.monitor_forms) iEEGViewModel (class in tvb.core.entities.file.simulator.view_model) Iext (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) (tvb.contrib.simulator.models.larter.Larter attribute) (tvb.contrib.simulator.models.larter_breakspear.LarterBreakspear attribute) (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute) (tvb.simulator.models.larter_breakspear.LarterBreakspear attribute) Iext2 (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) (tvb.simulator.models.epileptor.Epileptor attribute) II_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) IMAGES_FOLDER (tvb.core.entities.file.files_helper.FilesHelper attribute) ImaginaryCoherenceDisplay (class in tvb.adapters.visualizers.complex_imaginary_coherence) ImaginaryCoherenceDisplayForm (class in tvb.adapters.visualizers.complex_imaginary_coherence) ImaginaryCoherenceDisplayModel (class in tvb.adapters.visualizers.complex_imaginary_coherence) ImmutableAttrError import_adapters() (in module tvb.config.init.introspector_registry) import_conn_zip() (in module tvb.interfaces.command.lab) import_dt_index() (in module tvb.config.init.introspector_registry) import_from_file() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) import_h5() (in module tvb.interfaces.command.demos.importers.h5_import) import_project_operations() (tvb.core.services.import_service.ImportService method) import_project_structure() (tvb.core.services.import_service.ImportService method) import_simulator_configuration_zip() (tvb.core.services.import_service.ImportService method) ImportException ImportService (class in tvb.core.services.import_service) IN_OPERATION_EXECUTION_PROCESS (tvb.basic.config.settings.ClusterSettings attribute) (tvb.basic.config.settings.HPCSettings attribute) Include (class in tvb.dsl.NeuroML.lems.model.fundamental) (class in tvb.dsl_cuda.lems.model.fundamental) include_branch_button (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) include_directories (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) include_dirs (tvb.dsl.NeuroML.lems.parser.LEMS.LEMSFileParser attribute) (tvb.dsl_cuda.lems.parser.LEMS.LEMSFileParser attribute) include_file() (tvb.dsl.NeuroML.lems.model.model.Model method) include_includes (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl.NeuroML.lems.parser.LEMS.LEMSFileParser attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.parser.LEMS.LEMSFileParser attribute) include_launch_button (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) include_launch_pse_button (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) include_next_button (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) include_previous_button (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) include_setup_noise (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) include_setup_pse (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) include_setup_region_model (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) include_setup_surface_model (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) included_files (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) includes (tvb.dsl.NeuroML.lems.model.model.Model attribute) (tvb.dsl_cuda.lems.model.model.Model attribute) IncompatibleFileManagerException IncorrectTypeAttrError increment (tvb.dsl.NeuroML.lems.model.simulation.Run attribute) (tvb.dsl_cuda.lems.model.simulation.Run attribute) IndependentComponents (class in tvb.datatypes.mode_decompositions) IndependentComponentsH5 (class in tvb.adapters.datatypes.h5.mode_decompositions_h5) IndependentComponentsIndex (class in tvb.adapters.datatypes.db.mode_decompositions) index (tvb.dsl.NeuroML.lems.model.structure.With attribute) (tvb.dsl_cuda.lems.model.structure.With attribute) index() (tvb.interfaces.web.controllers.base_controller.BaseController method) (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController method) (tvb.interfaces.web.controllers.burst.noise_configuration_controller.NoiseConfigurationController method) (tvb.interfaces.web.controllers.burst.region_model_parameters_controller.RegionsModelParametersController method) (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) (tvb.interfaces.web.controllers.spatial.base_spatio_temporal_controller.SpatioTemporalController method) (tvb.interfaces.web.controllers.users_controller.UserController method) index_for_h5_file() (in module tvb.core.neocom.h5) index_parameters (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) IndexParameter (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) infected_threshold() (in module tvb.adapters.creators.allen_creator) init_cherrypy() (in module tvb.interfaces.web.run) init_noise_config_values() (tvb.interfaces.web.controllers.burst.noise_configuration_controller.NoiseConfigurationController static method) init_parser() (tvb.dsl.NeuroML.lems.parser.LEMS.LEMSFileParser method) (tvb.dsl_cuda.lems.parser.LEMS.LEMSFileParser method) initial (tvb.dsl.NeuroML.lems.model.dynamics.Regime attribute) (tvb.dsl_cuda.lems.model.dynamics.Regime attribute) initial() (tvb.simulator.models.base.Model method) initial_conditions (tvb.simulator.simulator.Simulator attribute) initialize() (in module tvb.config.init.initializer) (tvb.simulator.history.BaseHistory method) (tvb.simulator.history.DenseHistory method) initialize_flask() (in module tvb.interfaces.rest.server.run) initialize_for_deployment() (tvb.basic.config.profile_settings.BaseSettingsProfile method) (tvb.config.profile_settings.TestSQLiteProfile method) (tvb.config.profile_settings.WebSettingsProfile method) initialize_profile() (tvb.basic.config.profile_settings.BaseSettingsProfile method) (tvb.config.profile_settings.TestSQLiteProfile method) (tvb.config.profile_settings.WebSettingsProfile method) initialize_startup() (in module tvb.config.init.model_manager) initialize_storage() (in module tvb.core.services.project_service) initialize_tvb() (in module tvb.interfaces.rest.server.run) initialized (tvb.simulator.descriptors.Final.State attribute) (tvb.simulator.descriptors.NDArray.State attribute) initiate_operation() (tvb.core.services.operation_service.OperationService method) initiate_prelaunch() (tvb.core.services.operation_service.OperationService method) inj_f_thresh (tvb.adapters.creators.allen_creator.AllenConnectModel attribute) input_data (tvb.adapters.uploaders.csv_connectivity_importer.CSVConnectivityImporterModel attribute) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplayModel attribute) (tvb.adapters.visualizers.eeg_monitor.EegMonitorModel attribute) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumModel attribute) (tvb.adapters.visualizers.histogram.HistogramViewerModel attribute) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizerModel attribute) input_shape (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapter attribute) input_transformation() (tvb.analyzers.fmri_balloon.BalloonModel method) input_type (tvb.core.neotraits.forms.FloatField attribute) (tvb.core.neotraits.forms.SimpleFloatField attribute) insensitive_glob() (in module tvb.contrib.scripts.utils.file_utils) install_traced_noop() (in module tvb.interfaces.web.controllers.autologging) instance (tvb.dsl.NeuroML.lems.model.structure.With attribute) (tvb.dsl_cuda.lems.model.structure.With attribute) instance_requirements (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) instance_state (tvb.simulator.descriptors.NDArray attribute) InstanceRequirement (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component)

Int (class in tvb.basic.neotraits._attr) (class in tvb.basic.neotraits.api) Integrator (class in tvb.simulator.integrators) INTEGRATOR (tvb.adapters.simulator.subform_helper.SubformHelper.FormToConfigEnum attribute) (tvb.adapters.simulator.subforms_mapping.SubformsEnum attribute) integrator (tvb.analyzers.fmri_balloon.BalloonModel attribute) (tvb.core.entities.file.simulator.view_model.SimulatorAdapterModel attribute) (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive attribute) (tvb.simulator.simulator.Simulator attribute) integrator_changed() (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController method) integrator_class (tvb.core.entities.model.model_burst.Dynamic attribute) integrator_noise_rng_state_algo (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) integrator_noise_rng_state_cached_gauss (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) integrator_noise_rng_state_has_gauss (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) integrator_noise_rng_state_keys (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) integrator_noise_rng_state_pos (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) integrator_parameters (tvb.core.entities.model.model_burst.Dynamic attribute) integrator_parameters_changed() (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController method) IntegratorForm (class in tvb.adapters.simulator.integrator_forms) IntegratorStochastic (class in tvb.simulator.integrators) IntegratorStochasticForm (class in tvb.adapters.simulator.integrator_forms) IntegratorStochasticViewModel (class in tvb.core.entities.file.simulator.view_model) IntegratorViewModel (class in tvb.core.entities.file.simulator.view_model) INTERACTIVE_ELBOW_POINT (tvb.contrib.scripts.utils.data_structures_utils.CalculusConfig attribute) interest_area_indexes (tvb.adapters.creators.connectivity_creator.ConnectivityCreatorModel attribute) internal (tvb.contrib.scripts.datatypes.projections.TvbProjectionType attribute) IntField (class in tvb.core.neotraits.forms) introspect() (tvb.config.init.initializer.Introspector method) IntrospectionException IntrospectionRegistry (class in tvb.config.init.introspector_registry) Introspector (class in tvb.config.init.initializer) invalid (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.generic_attributes.GenericAttributes attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) InvalidExportDataException InvalidFilterChainInput InvalidFilterEntity InvalidFormValues InvalidIdentifierException InvalidInputException InvalidParameterException InvalidPortletConfiguration InvalidSettingsException InvalidTransactionAccess InvalidUpgradeScriptException invalis_name_msg (tvb.interfaces.web.controllers.project.project_controller.EditForm attribute) invdx (tvb.contrib.scripts.datatypes.lookup_tables.LookUpTable attribute) INVOKE_ADAPTER (tvb.core.adapters.abcdisplayer.URLGenerator attribute) invoke_adapter() (tvb.interfaces.web.controllers.flow_controller.FlowController method) iround() (in module tvb.simulator.common) is_administrator() (tvb.core.entities.model.model_project.User method) is_branch (tvb.adapters.creators.connectivity_creator.ConnectivityCreatorModel attribute) is_burst_name_ok() (tvb.adapters.simulator.simulator_fragments.SimulatorFinalFragment static method) is_data_a_group() (tvb.adapters.exporters.abcexporter.ABCExporter method) is_datatype_group() (tvb.core.entities.storage.datatype_dao.DatatypeDAO method) (tvb.core.services.project_service.ProjectService static method) is_distribution() (tvb.basic.config.environment.Environment static method) is_empty() (tvb.dsl.NeuroML.lems.base.stack.Stack method) (tvb.dsl_cuda.lems.base.stack.Stack method) is_file_up_to_date() (tvb.core.entities.file.files_update_manager.FilesUpdateManager method) is_first_run() (tvb.basic.config.stored.SettingsManager method) (tvb.basic.profile.TvbProfile static method) is_float() (in module tvb.contrib.scripts.utils.data_structures_utils) is_framework_present() (tvb.basic.config.environment.Environment method) is_func() (tvb.dsl.NeuroML.lems.parser.expr.ExprParser method) (tvb.dsl_cuda.lems.parser.expr.ExprParser method) is_group (tvb.core.entities.model.model_burst.BurstConfiguration attribute) (tvb.core.entities.transient.structure_entities.StructureNode attribute) is_integer() (in module tvb.contrib.scripts.utils.data_structures_utils) is_irelevant (tvb.core.entities.transient.structure_entities.StructureNode attribute) is_key_in_request_files() (tvb.interfaces.rest.server.resources.rest_resource.RestResource static method) is_library_mode() (tvb.basic.profile.TvbProfile static method) is_link (tvb.core.entities.transient.structure_entities.StructureNode attribute) is_linux() (tvb.basic.config.environment.Environment method) is_linux_deployment() (tvb.basic.config.environment.Environment method) is_mac() (tvb.basic.config.environment.Environment static method) is_mac_deployment() (tvb.basic.config.environment.Environment method) is_nan (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.generic_attributes.GenericAttributes attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) is_new_file (tvb.core.neotraits._h5core.H5File attribute) (tvb.core.neotraits.h5.H5File attribute) is_numeric() (in module tvb.contrib.scripts.utils.data_structures_utils) is_old_form (tvb.core.services.import_service.Operation2ImportData attribute) is_online_help_active() (tvb.core.entities.model.model_project.User method) is_op() (tvb.dsl.NeuroML.lems.parser.expr.ExprParser method) (tvb.dsl_cuda.lems.parser.expr.ExprParser method) is_pse_burst() (tvb.core.entities.model.model_burst.BurstConfiguration method) is_range1_float() (tvb.adapters.visualizers.pse.PSEModel method) is_range2_float() (tvb.adapters.visualizers.pse.PSEModel method) is_right_hemisphere() (tvb.datatypes.connectivity.Connectivity method) IS_RUNNING_ON_CLUSTER_NODE (tvb.basic.config.settings.ClusterSettings attribute) is_storage_ready() (tvb.interfaces.web.controllers.users_controller.UserController method) is_surface_simulation (tvb.simulator.simulator.Simulator attribute) is_sym() (tvb.dsl.NeuroML.lems.parser.expr.ExprParser method) (tvb.dsl_cuda.lems.parser.expr.ExprParser method) is_upload_operation() (tvb.core.entities.storage.operation_dao.OperationDAO method) (tvb.core.services.project_service.ProjectService static method) is_username_valid() (tvb.core.services.user_service.UserService static method) is_valid_hdf5_file() (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager method) is_windows() (tvb.basic.config.environment.Environment static method) is_windows_deployment() (tvb.basic.config.environment.Environment method) isequal_string() (in module tvb.contrib.scripts.utils.data_structures_utils) ISOCLINE_PSE_ADAPTER_CLASS (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) ISOCLINE_PSE_ADAPTER_MODULE (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) IsoclinePSEAdapter (class in tvb.adapters.visualizers.pse_isocline) IsoclinePSEAdapterForm (class in tvb.adapters.visualizers.pse_isocline) IsoclinePSEAdapterModel (class in tvb.adapters.visualizers.pse_isocline) istep (tvb.simulator.monitors.Monitor attribute) iter_accessors() (tvb.core.neotraits._h5core.H5File method) (tvb.core.neotraits.h5.H5File method) iter_datasets() (tvb.core.neotraits._h5core.H5File method) (tvb.core.neotraits.h5.H5File method) iterable_to_dict() (in module tvb.contrib.scripts.utils.data_structures_utils)

J

j (tvb.dsl.NeuroML.lems.model.fundamental.Dimension attribute) (tvb.dsl_cuda.lems.model.fundamental.Dimension attribute) J (tvb.simulator.models.jansen_rit.JansenRit attribute) J11 (tvb.contrib.simulator.models.wong_wang.WongWang attribute) J12 (tvb.contrib.simulator.models.wong_wang.WongWang attribute) J21 (tvb.contrib.simulator.models.wong_wang.WongWang attribute) J22 (tvb.contrib.simulator.models.wong_wang.WongWang attribute) J_ext (tvb.contrib.simulator.models.wong_wang.WongWang attribute) J_N (tvb.simulator.models.wong_wang.ReducedWongWang attribute) JANSEN_RIT (tvb.simulator.models.ModelsEnum attribute) JansenRit (class in tvb.simulator.models.jansen_rit) JansenRitDavid (class in tvb.contrib.simulator.models.jansen_rit_david) JansenRitModelForm (class in tvb.adapters.simulator.model_forms) job_id (tvb.core.entities.model.model_operation.OperationProcessIdentifier attribute)

JOB_ID_STRING (tvb.basic.config.settings.ClusterSettings attribute) JOB_MOUNT_POINT_KEY (tvb.basic.config.settings.HPCSettings attribute) JOB_STATUS_KEY (tvb.basic.config.settings.HPCSettings attribute) join_labels_indices_dict() (in module tvb.contrib.scripts.utils.data_structures_utils) JointDegree (class in tvb.adapters.analyzers.bct_degree_adapters) Json (class in tvb.core.neotraits._h5accessors) (class in tvb.core.neotraits.h5) JsonFinal (class in tvb.core.neotraits._h5accessors) JsonFinal.StateVariablesDecoder (class in tvb.core.neotraits._h5accessors) JsonFinal.StateVariablesEncoder (class in tvb.core.neotraits._h5accessors) jsonify() (in module tvb.interfaces.web.controllers.decorators) JsonRange (class in tvb.core.neotraits._h5accessors) jump_to_end() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method) jump_to_start() (tvb.simulator.plot.timeseries_interactive.TimeSeriesInteractive method)

K

k (tvb.dsl.NeuroML.lems.model.fundamental.Dimension attribute) (tvb.dsl_cuda.lems.model.fundamental.Dimension attribute) K11 (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) K12 (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) K21 (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) k_e (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) k_i (tvb.simulator.models.wilson_cowan.WilsonCowan attribute) ke (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) ke_2 (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) keke (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) key (tvb.core.entities.model.model_project.UserPreferences attribute) KEY_ADMIN_DISPLAY_NAME (tvb.core.services.settings_service.SettingsService attribute) KEY_ADMIN_EMAIL (tvb.core.services.settings_service.SettingsService attribute) KEY_ADMIN_NAME (tvb.core.services.settings_service.SettingsService attribute) KEY_ADMIN_PWD (tvb.core.services.settings_service.SettingsService attribute) KEY_AUTHOR (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_BURST (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_CACHED_DYNAMIC_MODEL (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController attribute) KEY_CLASS_NAME (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_CLUSTER (tvb.core.services.settings_service.SettingsService attribute) KEY_CLUSTER_SCHEDULER (tvb.core.services.settings_service.SettingsService attribute) KEY_CONTENT (tvb.core.adapters.abcdisplayer.ABCDisplayer attribute) KEY_COUNT (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_CREATE_DATA_DAY (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_CREATE_DATA_MONTH (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_CUTOFF (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator attribute) KEY_DATATYPE_ID (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_DATE (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_DB_URL (tvb.core.services.settings_service.SettingsService attribute) KEY_DISPLAY_NAME (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator attribute) KEY_EDGE_TRACT (tvb.adapters.uploaders.networkx_connectivity.parser.NetworkxParser attribute) key_edge_tract (tvb.adapters.uploaders.networkx_importer.NetworkxImporterModel attribute) KEY_EDGE_WEIGHT (tvb.adapters.uploaders.networkx_connectivity.parser.NetworkxParser attribute) key_edge_weight (tvb.adapters.uploaders.networkx_importer.NetworkxImporterModel attribute) KEY_ENABLE_KC_LOGIN (tvb.core.services.settings_service.SettingsService attribute) KEY_EQUATION (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator attribute) KEY_FILENAME (tvb.core.entities.transient.structure_entities.GenericMetaData attribute) KEY_FK_OPERATION_GROUP (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_FLOAT_HI (tvb.core.entities.transient.range_parameter.RangeParameter attribute) KEY_FLOAT_LO (tvb.core.entities.transient.range_parameter.RangeParameter attribute) KEY_FLOAT_STEP (tvb.core.entities.transient.range_parameter.RangeParameter attribute) KEY_FOCAL_POINTS_TRIANGLES (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator attribute) KEY_GID (tvb.core.entities.transient.structure_entities.GenericMetaData attribute) KEY_INVALID (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_IS_ADAPTER (tvb.core.adapters.abcdisplayer.ABCDisplayer attribute) KEY_IS_LOAD_AFTER_REDIRECT (tvb.interfaces.web.controllers.simulator_controller.SimulatorController attribute) KEY_KC_CONFIG (tvb.core.services.settings_service.SettingsService attribute) KEY_KC_WEB_CONFIG (tvb.core.services.settings_service.SettingsService attribute) KEY_LINK (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_MATLAB_EXECUTABLE (tvb.core.services.settings_service.SettingsService attribute) KEY_MAX_DISK_SPACE_USR (tvb.core.services.settings_service.SettingsService attribute) KEY_MAX_NR_SURFACE_VERTEX (tvb.core.services.settings_service.SettingsService attribute) KEY_MAX_NR_THREADS (tvb.core.services.settings_service.SettingsService attribute) KEY_MAX_RANGE (tvb.core.services.settings_service.SettingsService attribute) KEY_MODULE (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_NODE_COORDINATES (tvb.adapters.uploaders.networkx_connectivity.parser.NetworkxParser attribute)

key_node_coordinates (tvb.adapters.uploaders.networkx_importer.NetworkxImporterModel attribute) KEY_NODE_HEMISPHERE (tvb.adapters.uploaders.networkx_connectivity.parser.NetworkxParser attribute) key_node_hemisphere (tvb.adapters.uploaders.networkx_importer.NetworkxImporterModel attribute) KEY_NODE_LABEL (tvb.adapters.uploaders.networkx_connectivity.parser.NetworkxParser attribute) key_node_label (tvb.adapters.uploaders.networkx_importer.NetworkxImporterModel attribute) KEY_NODE_REGION (tvb.adapters.uploaders.networkx_connectivity.parser.NetworkxParser attribute) key_node_region (tvb.adapters.uploaders.networkx_importer.NetworkxImporterModel attribute) KEY_NODE_TYPE (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_OP_GROUP_ID (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_OPERATION_ALGORITHM (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_OPERATION_FILTERS (tvb.interfaces.web.controllers.project.project_controller.ProjectController attribute) KEY_OPERATION_GROUP_NAME (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_OPERATION_TAG (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_OPERATION_TYPE (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_OPTION_READ_METADATA (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporterModel attribute) KEY_PARAM1 (tvb.adapters.simulator.simulator_fragments.SimulatorPSERangeFragment attribute) KEY_PARAM2 (tvb.adapters.simulator.simulator_fragments.SimulatorPSERangeFragment attribute) KEY_PARAMETERS (tvb.core.neotraits._h5accessors.EquationScalar attribute) KEY_PORT (tvb.core.services.settings_service.SettingsService attribute) KEY_RELEVANCY (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_SELECTED_DB (tvb.core.services.settings_service.SettingsService attribute) KEY_SPATIAL (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator attribute) KEY_STATE (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_STORAGE (tvb.core.services.settings_service.SettingsService attribute) KEY_SUBJECT (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_SURFACE (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator attribute) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator attribute) KEY_TAG_1 (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_TAG_2 (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_TAG_3 (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_TAG_4 (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_TAG_5 (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_TEMPORAL (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator attribute) KEY_TITLE (tvb.core.entities.transient.structure_entities.DataTypeMetaData attribute) KEY_TYPE (tvb.core.neotraits._h5accessors.EquationScalar attribute) KEY_VIEW_MODEL (tvb.interfaces.web.entities.context_selected_adapter.SelectedAdapterContext attribute) KEY_WRITTEN_BY (tvb.core.neotraits._h5core.H5File attribute) (tvb.core.neotraits.h5.H5File attribute) KEYCLOAK_REFRESH_TOKEN (tvb.interfaces.rest.commons.strings.FormKeyInput attribute) keycloak_web_config() (tvb.interfaces.web.controllers.users_controller.UserController method) KeycloakLoginForm (class in tvb.interfaces.web.controllers.users_controller) KEYS_DISPLAY_ORDER (tvb.core.services.settings_service.SettingsService attribute) Kf (tvb.simulator.models.epileptor.Epileptor attribute) ki (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) ki_2 (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) kiki (tvb.simulator.models.jansen_rit.ZetterbergJansen attribute) kinetic_schemes (tvb.dsl.NeuroML.lems.model.dynamics.Behavioral attribute) (tvb.dsl_cuda.lems.model.dynamics.Behavioral attribute) KineticScheme (class in tvb.dsl.NeuroML.lems.model.dynamics) (class in tvb.dsl_cuda.lems.model.dynamics) Kpop1 (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) Kpop2 (tvb.contrib.simulator.models.epileptor.HMJEpileptor attribute) Ks (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute) Kuramoto (class in tvb.simulator.coupling) (class in tvb.simulator.models.oscillator) KURAMOTO (tvb.simulator.models.ModelsEnum attribute) KuramotoCouplingForm (class in tvb.adapters.simulator.coupling_forms) KuramotoIndex (class in tvb.analyzers.metric_kuramoto_index) KuramotoModelForm (class in tvb.adapters.simulator.model_forms) Kvf (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute)

L

l (tvb.dsl.NeuroML.lems.model.fundamental.Dimension attribute) (tvb.dsl_cuda.lems.model.fundamental.Dimension attribute) label (tvb.core.neotraits.forms.Option attribute) labels (tvb.datatypes.sensors.Sensors attribute) labels2inds() (tvb.contrib.scripts.datatypes.base.BaseModel static method) labels_dimensions (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries attribute) (tvb.datatypes.time_series.TimeSeries attribute) labels_ordering (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.contrib.scripts.datatypes.time_series.TimeSeriesRegion attribute) (tvb.contrib.scripts.datatypes.time_series.TimeSeriesSensors attribute) (tvb.contrib.scripts.datatypes.time_series.TimeSeriesSurface attribute) (tvb.contrib.scripts.datatypes.time_series.TimeSeriesVolume attribute) (tvb.contrib.scripts.datatypes.time_series_xarray.TimeSeries attribute) (tvb.datatypes.fcd.Fcd attribute) (tvb.datatypes.graph.CorrelationCoefficients attribute) (tvb.datatypes.temporal_correlations.CrossCorrelation attribute) (tvb.datatypes.time_series.TimeSeries attribute) (tvb.datatypes.time_series.TimeSeriesEEG attribute) (tvb.datatypes.time_series.TimeSeriesMEG attribute) (tvb.datatypes.time_series.TimeSeriesRegion attribute) (tvb.datatypes.time_series.TimeSeriesSEEG attribute) (tvb.datatypes.time_series.TimeSeriesSurface attribute) (tvb.datatypes.time_series.TimeSeriesVolume attribute) labels_to_inds() (in module tvb.contrib.scripts.utils.data_structures_utils) lambd (tvb.contrib.simulator.models.liley_steynross.LileySteynRoss attribute) lambda_Nbar (tvb.contrib.simulator.models.morris_lecar.MorrisLecar attribute) laplace() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) laplace_beltrami() (tvb.datatypes.surfaces.Surface method) Larter (class in tvb.contrib.simulator.models.larter) LARTER_BREAKSPEAR (tvb.simulator.models.ModelsEnum attribute) LarterBreakspear (class in tvb.contrib.simulator.models.larter_breakspear) (class in tvb.simulator.models.larter_breakspear) LarterBreakspearModelForm (class in tvb.adapters.simulator.model_forms) last_introspection_check (tvb.core.entities.model.model_operation.Algorithm attribute) (tvb.core.entities.model.model_operation.AlgorithmCategory attribute) (tvb.core.entities.model.model_workflow.Portlet attribute) last_updated (tvb.core.entities.model.model_project.Project attribute) launch() (tvb.adapters.analyzers.bct_adapters.BaseBCT method) (tvb.adapters.analyzers.bct_adapters.BaseUndirected method) (tvb.adapters.analyzers.bct_adapters.DistanceDBIN method) (tvb.adapters.analyzers.bct_adapters.DistanceNETW method) (tvb.adapters.analyzers.bct_adapters.DistanceRDM method) (tvb.adapters.analyzers.bct_adapters.ModularityOCSM method) (tvb.adapters.analyzers.bct_centrality_adapters.CentralityEdgeBinary method) (tvb.adapters.analyzers.bct_centrality_adapters.CentralityEdgeWeighted method) (tvb.adapters.analyzers.bct_centrality_adapters.CentralityEigenVector method) (tvb.adapters.analyzers.bct_centrality_adapters.CentralityKCoreness method) (tvb.adapters.analyzers.bct_centrality_adapters.CentralityKCorenessBD method) (tvb.adapters.analyzers.bct_centrality_adapters.CentralityNodeBinary method) (tvb.adapters.analyzers.bct_centrality_adapters.CentralityNodeWeighted method) (tvb.adapters.analyzers.bct_centrality_adapters.CentralityShortcuts method) (tvb.adapters.analyzers.bct_centrality_adapters.FlowCoefficients method) (tvb.adapters.analyzers.bct_centrality_adapters.ParticipationCoefficient method) (tvb.adapters.analyzers.bct_centrality_adapters.ParticipationCoefficientSign method) (tvb.adapters.analyzers.bct_centrality_adapters.SubgraphCentrality method) (tvb.adapters.analyzers.bct_clustering_adapters.ClusteringCoefficient method) (tvb.adapters.analyzers.bct_clustering_adapters.ClusteringCoefficientBU method) (tvb.adapters.analyzers.bct_clustering_adapters.ClusteringCoefficientWD method) (tvb.adapters.analyzers.bct_clustering_adapters.ClusteringCoefficientWU method) (tvb.adapters.analyzers.bct_clustering_adapters.TransitivityBinaryDirected method) (tvb.adapters.analyzers.bct_clustering_adapters.TransitivityBinaryUnDirected method) (tvb.adapters.analyzers.bct_clustering_adapters.TransitivityWeightedDirected method) (tvb.adapters.analyzers.bct_clustering_adapters.TransitivityWeightedUnDirected method) (tvb.adapters.analyzers.bct_degree_adapters.Degree method) (tvb.adapters.analyzers.bct_degree_adapters.DegreeIOD method) (tvb.adapters.analyzers.bct_degree_adapters.DensityDirected method) (tvb.adapters.analyzers.bct_degree_adapters.JointDegree method) (tvb.adapters.analyzers.bct_degree_adapters.MatchingIndex method) (tvb.adapters.analyzers.bct_degree_adapters.Strength method) (tvb.adapters.analyzers.bct_degree_adapters.StrengthISOS method) (tvb.adapters.analyzers.bct_degree_adapters.StrengthWeights method) (tvb.adapters.analyzers.cross_correlation_adapter.CrossCorrelateAdapter method) (tvb.adapters.analyzers.cross_correlation_adapter.PearsonCorrelationCoefficientAdapter method) (tvb.adapters.analyzers.fcd_adapter.FunctionalConnectivityDynamicsAdapter method) (tvb.adapters.analyzers.fmri_balloon_adapter.BalloonModelAdapter method) (tvb.adapters.analyzers.fourier_adapter.FourierAdapter method) (tvb.adapters.analyzers.ica_adapter.ICAAdapter method) (tvb.adapters.analyzers.metrics_group_timeseries.TimeseriesMetricsAdapter method) (tvb.adapters.analyzers.node_coherence_adapter.NodeCoherenceAdapter method) (tvb.adapters.analyzers.node_complex_coherence_adapter.NodeComplexCoherenceAdapter method) (tvb.adapters.analyzers.node_covariance_adapter.NodeCovarianceAdapter method) (tvb.adapters.analyzers.pca_adapter.PCAAdapter method) (tvb.adapters.analyzers.wavelet_adapter.ContinuousWaveletTransformAdapter method) (tvb.adapters.creators.allen_creator.AllenConnectomeBuilder method) (tvb.adapters.creators.connectivity_creator.ConnectivityCreator method) (tvb.adapters.creators.local_connectivity_creator.LocalConnectivityCreator method) (tvb.adapters.creators.stimulus_creator.RegionStimulusCreator method) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator method) (tvb.adapters.simulator.hpc_simulator_adapter.HPCSimulatorAdapter method) (tvb.adapters.simulator.simulator_adapter.SimulatorAdapter method) (tvb.adapters.uploaders.brco_importer.BRCOImporter method) (tvb.adapters.uploaders.connectivity_measure_importer.ConnectivityMeasureImporter method) (tvb.adapters.uploaders.csv_connectivity_importer.CSVConnectivityImporter method) (tvb.adapters.uploaders.gifti_surface_importer.GIFTISurfaceImporter method) (tvb.adapters.uploaders.gifti_timeseries_importer.GIFTITimeSeriesImporter method) (tvb.adapters.uploaders.mat_timeseries_importer.RegionTimeSeriesImporter method) (tvb.adapters.uploaders.networkx_importer.NetworkxConnectivityImporter method) (tvb.adapters.uploaders.nifti_importer.NIFTIImporter method) (tvb.adapters.uploaders.obj_importer.ObjSurfaceImporter method) (tvb.adapters.uploaders.projection_matrix_importer.ProjectionMatrixSurfaceEEGImporter method) (tvb.adapters.uploaders.region_mapping_importer.RegionMappingImporter method) (tvb.adapters.uploaders.sensors_importer.SensorsImporter method) (tvb.adapters.uploaders.tract_importer.TrackvizTractsImporter method) (tvb.adapters.uploaders.tract_importer.ZipTxtTractsImporter method) (tvb.adapters.uploaders.tvb_importer.TVBImporter method) (tvb.adapters.uploaders.zip_connectivity_importer.ZIPConnectivityImporter method) (tvb.adapters.uploaders.zip_surface_importer.ZIPSurfaceImporter method) (tvb.adapters.visualizers.annotations_viewer.ConnectivityAnnotationsView method) (tvb.adapters.visualizers.brain.BrainViewer method) (tvb.adapters.visualizers.brain.DualBrainViewer method) (tvb.adapters.visualizers.complex_imaginary_coherence.ImaginaryCoherenceDisplay method) (tvb.adapters.visualizers.connectivity.ConnectivityViewer method) (tvb.adapters.visualizers.connectivity_edge_bundle.ConnectivityEdgeBundle method) (tvb.adapters.visualizers.cross_coherence.CrossCoherenceVisualizer method) (tvb.adapters.visualizers.cross_correlation.CrossCorrelationVisualizer method) (tvb.adapters.visualizers.eeg_monitor.EegMonitor method) (tvb.adapters.visualizers.fourier_spectrum.FourierSpectrumDisplay method) (tvb.adapters.visualizers.histogram.HistogramViewer method) (tvb.adapters.visualizers.ica.ICA method) (tvb.adapters.visualizers.local_connectivity_view.LocalConnectivityViewer method) (tvb.adapters.visualizers.matrix_viewer.MappedArrayVisualizer method) (tvb.adapters.visualizers.pca.PCA method) (tvb.adapters.visualizers.pearson_cross_correlation.PearsonCorrelationCoefficientVisualizer method) (tvb.adapters.visualizers.pearson_edge_bundle.PearsonEdgeBundle method) (tvb.adapters.visualizers.pse_discrete.DiscretePSEAdapter method) (tvb.adapters.visualizers.pse_isocline.IsoclinePSEAdapter method) (tvb.adapters.visualizers.region_volume_mapping.ConnectivityMeasureVolumeVisualizer method) (tvb.adapters.visualizers.region_volume_mapping.MappedArrayVolumeVisualizer method) (tvb.adapters.visualizers.region_volume_mapping.MriVolumeVisualizer method) (tvb.adapters.visualizers.region_volume_mapping.RegionVolumeMappingVisualiser method) (tvb.adapters.visualizers.sensors.SensorsViewer method) (tvb.adapters.visualizers.surface_view.ConnectivityMeasureOnSurfaceViewer method) (tvb.adapters.visualizers.surface_view.RegionMappingViewer method) (tvb.adapters.visualizers.surface_view.SurfaceViewer method) (tvb.adapters.visualizers.time_series.TimeSeriesDisplay method) (tvb.adapters.visualizers.time_series_volume.TimeSeriesVolumeVisualiser method) (tvb.adapters.visualizers.topographic.TopographicViewer method) (tvb.adapters.visualizers.tract.TractViewer method) (tvb.adapters.visualizers.wavelet_spectrogram.WaveletSpectrogramVisualizer method) (tvb.core.adapters.abcadapter.ABCAdapter method) (tvb.interfaces.command.demos.importers.new_importer.FooDataImporter method) LAUNCH_ANALYZERS_MODEL_FILE (tvb.interfaces.rest.commons.strings.RequestFileKey attribute) LAUNCH_BRANCH (tvb.core.services.burst_service.BurstService attribute) launch_mode (tvb.adapters.creators.stimulus_creator.RegionStimulusCreator attribute) (tvb.adapters.creators.stimulus_creator.SurfaceStimulusCreator attribute) (tvb.core.adapters.abcadapter.ABCAdapter attribute) (tvb.core.adapters.abcdisplayer.ABCDisplayer attribute) (tvb.core.adapters.abcuploader.ABCUploader attribute) LAUNCH_NEW (tvb.core.services.burst_service.BurstService attribute) LAUNCH_OPERATION (tvb.interfaces.rest.commons.strings.RestLink attribute) launch_operation() (tvb.core.services.operation_service.OperationService method) (tvb.interfaces.rest.client.tvb_client.TVBClient method) (tvb.interfaces.rest.server.facades.operation_facade.OperationFacade method) launch_pse() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) LAUNCH_PSE_URL (tvb.interfaces.web.controllers.simulator_controller.SimulatorWizzardURLs attribute) launch_simulation() (tvb.interfaces.rest.server.facades.simulation_facade.SimulationFacade method) (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) launchable (tvb.config.algorithm_categories.AlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.AnalyzeAlgorithmCategoryConfig attribute) (tvb.config.algorithm_categories.ViewAlgorithmCategoryConfig attribute) (tvb.core.entities.model.model_operation.AlgorithmCategory attribute) LaunchException launchloader() (tvb.interfaces.web.controllers.project.project_controller.ProjectController method) left (tvb.dsl.NeuroML.lems.parser.expr.OpNode attribute) (tvb.dsl_cuda.lems.parser.expr.OpNode attribute) LEFT_SUFFIX_RE (tvb.adapters.uploaders.zip_surface.parser.ZipSurfaceParser attribute) legendtext (built-in class) lems_file() (in module tvb.dsl.LEMS2python) (in module tvb.dsl_cuda.LEMS2CUDA) LEMSBase (class in tvb.dsl.NeuroML.lems.base.base) (class in tvb.dsl_cuda.lems.base.base) LEMSError, [1] LEMSFileParser (class in tvb.dsl.NeuroML.lems.parser.LEMS) (class in tvb.dsl_cuda.lems.parser.LEMS) LEMSXMLNode (class in tvb.dsl.NeuroML.lems.parser.LEMS) (class in tvb.dsl_cuda.lems.parser.LEMS) LFP (tvb.contrib.scripts.datatypes.time_series.PossibleVariables attribute) LIBRARY_PROFILE (tvb.basic.profile.TvbProfile attribute) LibrarySettingsProfile (class in tvb.basic.config.profile_settings) LileySteynRoss (class in tvb.contrib.simulator.models.liley_steynross) LINE (tvb.interfaces.command.benchmark.Bench attribute) Linear (class in tvb.datatypes.equations) (class in tvb.simulator.coupling) (class in tvb.simulator.models.linear) LINEAR (tvb.simulator.models.ModelsEnum attribute) linear_index_to_coordinate_tuples() (in module tvb.contrib.scripts.utils.data_structures_utils) linear_interp1d() (in module tvb.simulator.common) LinearCouplingForm (class in tvb.adapters.simulator.coupling_forms) LinearEquationForm (class in tvb.adapters.simulator.equation_forms) LinearModelForm (class in tvb.adapters.simulator.model_forms) Link (class in tvb.dsl.NeuroML.lems.model.component) (class in tvb.dsl_cuda.lems.model.component) linked_has_traits (tvb.core.entities.file.simulator.view_model.AdditiveNoiseViewModel attribute) (tvb.core.entities.file.simulator.view_model.BoldRegionROIViewModel attribute) (tvb.core.entities.file.simulator.view_model.BoldViewModel attribute) (tvb.core.entities.file.simulator.view_model.CortexViewModel attribute) (tvb.core.entities.file.simulator.view_model.Dop853StochasticViewModel attribute) (tvb.core.entities.file.simulator.view_model.Dop853ViewModel attribute) (tvb.core.entities.file.simulator.view_model.Dopri5StochasticViewModel attribute) (tvb.core.entities.file.simulator.view_model.Dopri5ViewModel attribute) (tvb.core.entities.file.simulator.view_model.EEGViewModel attribute) (tvb.core.entities.file.simulator.view_model.EulerDeterministicViewModel attribute) (tvb.core.entities.file.simulator.view_model.EulerStochasticViewModel attribute) (tvb.core.entities.file.simulator.view_model.GlobalAverageViewModel attribute) (tvb.core.entities.file.simulator.view_model.HeunDeterministicViewModel attribute) (tvb.core.entities.file.simulator.view_model.HeunStochasticViewModel attribute) (tvb.core.entities.file.simulator.view_model.IdentityViewModel attribute) (tvb.core.entities.file.simulator.view_model.IntegratorStochasticViewModel attribute) (tvb.core.entities.file.simulator.view_model.IntegratorViewModel attribute) (tvb.core.entities.file.simulator.view_model.MEGViewModel attribute) (tvb.core.entities.file.simulator.view_model.MonitorViewModel attribute) (tvb.core.entities.file.simulator.view_model.MultiplicativeNoiseViewModel attribute) (tvb.core.entities.file.simulator.view_model.NoiseViewModel attribute) (tvb.core.entities.file.simulator.view_model.ProjectionViewModel attribute) (tvb.core.entities.file.simulator.view_model.RawViewModel attribute) (tvb.core.entities.file.simulator.view_model.RungeKutta4thOrderDeterministicViewModel attribute) (tvb.core.entities.file.simulator.view_model.SimulatorAdapterModel attribute) (tvb.core.entities.file.simulator.view_model.SpatialAverageViewModel attribute) (tvb.core.entities.file.simulator.view_model.SubSampleViewModel attribute) (tvb.core.entities.file.simulator.view_model.TemporalAverageViewModel attribute) (tvb.core.entities.file.simulator.view_model.VODEStochasticViewModel attribute) (tvb.core.entities.file.simulator.view_model.VODEViewModel attribute) (tvb.core.entities.file.simulator.view_model.iEEGViewModel attribute) linked_has_traits() (tvb.core.neotraits.view_model.ViewModel method) LinkPlaceholder (class in tvb.interfaces.rest.commons.strings) Links (class in tvb.core.entities.model.model_datatype) links (tvb.dsl.NeuroML.lems.model.component.Fat attribute) (tvb.dsl_cuda.lems.model.component.Fat attribute) linspace_broadcast() (in module tvb.contrib.scripts.utils.data_structures_utils) LinspaceRange (class in tvb.basic.neotraits._attr) (class in tvb.basic.neotraits.api) List (class in tvb.basic.neotraits._attr) (class in tvb.basic.neotraits.api) list (tvb.dsl.NeuroML.lems.model.structure.With attribute) (tvb.dsl_cuda.lems.model.structure.With attribute) list_datatypes() (in module tvb.interfaces.command.lab) list_of_dicts_to_dict_of_lists() (in module tvb.contrib.scripts.utils.data_structures_utils) list_of_dicts_to_dict_of_tuples() (in module tvb.contrib.scripts.utils.data_structures_utils) list_of_dicts_to_dicts_of_ndarrays() (in module tvb.contrib.scripts.utils.data_structures_utils) list_of_strings_to_string() (in module tvb.contrib.scripts.utils.data_structures_utils) list_projects() (in module tvb.interfaces.command.lab) LO_FIELD (tvb.adapters.simulator.simulator_fragments.SimulatorPSERangeFragment attribute) load() (in module tvb.core.neocom.h5), [1] (tvb.core.neocom._h5loader.DirLoader method) (tvb.core.neocom._h5loader.Loader method) (tvb.core.neotraits._h5accessors.Accessor method) (tvb.core.neotraits._h5accessors.DataSet method) (tvb.core.neotraits._h5accessors.EquationScalar method) (tvb.core.neotraits._h5accessors.Json method) (tvb.core.neotraits._h5accessors.JsonRange method) (tvb.core.neotraits._h5accessors.Scalar method) (tvb.core.neotraits._h5accessors.SparseMatrix method) (tvb.core.neotraits._h5accessors.Uuid method) (tvb.core.neotraits.h5.DataSet method) (tvb.core.neotraits.h5.Json method) (tvb.core.neotraits.h5.Reference method) (tvb.core.neotraits.h5.Scalar method) (tvb.core.neotraits.h5.SparseMatrix method) load_burst_configuration() (tvb.core.services.burst_service.BurstService method)

load_burst_configuration_from_folder() (tvb.core.services.burst_service.BurstService method) load_burst_history() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) load_burst_read_only() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) load_complete_by_function() (tvb.core.neocom._h5loader.TVBLoader method) load_datatype_from_file() (tvb.core.services.import_service.ImportService method) (tvb.interfaces.rest.client.tvb_client.TVBClient method) load_datatype_with_full_references() (tvb.interfaces.rest.client.tvb_client.TVBClient method) load_datatype_with_links() (tvb.interfaces.rest.client.tvb_client.TVBClient method) load_dt() (in module tvb.interfaces.command.lab) load_entity_by_gid() (in module tvb.core.entities.load) (tvb.core.adapters.abcadapter.ABCAdapter method) load_figure() (tvb.core.entities.storage.operation_dao.OperationDAO method) (tvb.core.services.figure_service.FigureService static method) load_from_dir() (in module tvb.core.neocom.h5) load_from_index() (in module tvb.core.neocom.h5) (tvb.core.neocom._h5loader.TVBLoader method) load_from_zip() (tvb.core.services.simulator_service.SimulatorService method) load_generic_attributes() (tvb.core.neotraits._h5core.H5File method) (tvb.core.neotraits.h5.H5File method) load_into() (tvb.adapters.datatypes.h5.connectivity_h5.ConnectivityH5 method) (tvb.adapters.datatypes.h5.graph_h5.ConnectivityMeasureH5 method) (tvb.adapters.datatypes.h5.local_connectivity_h5.LocalConnectivityH5 method) (tvb.adapters.datatypes.h5.sensors_h5.SensorsH5 method) (tvb.core.entities.file.simulator.burst_configuration_h5.BurstConfigurationH5 method) (tvb.core.neotraits._h5core.H5File method) (tvb.core.neotraits.h5.H5File method) load_local_connectivity() (tvb.interfaces.web.controllers.spatial.local_connectivity_controller.LocalConnectivityController method) load_model() (in module tvb.dsl.LEMS2python) (in module tvb.dsl_cuda.LEMS2CUDA) load_operation() (tvb.core.services.operation_service.OperationService static method) load_operation_by_gid() (tvb.core.services.project_service.ProjectService static method) load_operation_lazy_by_gid() (tvb.core.services.project_service.ProjectService static method) load_readonly (tvb.interfaces.web.controllers.simulator_controller.SimulatorFragmentRenderingRules attribute) load_region_stimulus() (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController method) load_simulator_configuration_from_zip() (tvb.interfaces.web.controllers.simulator_controller.SimulatorController method) load_surface_stimulus() (tvb.interfaces.web.controllers.spatial.surface_stimulus_controller.SurfaceStimulusController method) load_traited_by_gid() (tvb.adapters.simulator.hpc_simulator_adapter.HPCSimulatorAdapter method) (tvb.adapters.simulator.hpc_simulator_adapter.HPCTimeseriesMetricsAdapter method) (tvb.core.adapters.abcadapter.ABCAdapter method) load_view_model() (in module tvb.core.neocom.h5) (tvb.core.adapters.abcadapter.ABCAdapter method) load_view_model_from_file() (in module tvb.core.neocom.h5) load_with_links() (in module tvb.core.neocom.h5) (tvb.core.neocom._h5loader.TVBLoader method) load_with_links_from_dir() (in module tvb.core.neocom.h5) load_with_references() (in module tvb.core.neocom.h5), [1] (tvb.adapters.simulator.hpc_simulator_adapter.HPCSimulatorAdapter method) (tvb.core.adapters.abcadapter.ABCAdapter method) (tvb.core.neocom._h5loader.TVBLoader method) load_with_references_from_dir() (in module tvb.core.neocom.h5) Loader (class in tvb.core.neocom._h5loader) local (tvb.dsl.NeuroML.lems.model.component.ComponentReference attribute) (tvb.dsl_cuda.lems.model.component.ComponentReference attribute) local_conn (tvb.adapters.visualizers.local_connectivity_view.LocalConnectivityViewerModel attribute) local_connectivity (tvb.contrib.scripts.datatypes.head.Head attribute) (tvb.core.entities.file.simulator.view_model.CortexViewModel attribute) (tvb.datatypes.cortex.Cortex attribute) LocalConnectivity (class in tvb.contrib.scripts.datatypes.local_connectivity) (class in tvb.datatypes.local_connectivity) LocalConnectivityController (class in tvb.interfaces.web.controllers.spatial.local_connectivity_controller) LocalConnectivityCreator (class in tvb.adapters.creators.local_connectivity_creator) LocalConnectivityCreatorForm (class in tvb.adapters.creators.local_connectivity_creator) LocalConnectivityCreatorModel (class in tvb.adapters.creators.local_connectivity_creator) LocalConnectivityH5 (class in tvb.adapters.datatypes.h5.local_connectivity_h5) LocalConnectivityIndex (class in tvb.adapters.datatypes.db.local_connectivity) LocalConnectivitySelectorForm (class in tvb.adapters.creators.local_connectivity_creator) LocalConnectivityViewer (class in tvb.adapters.visualizers.local_connectivity_view) LocalConnectivityViewerForm (class in tvb.adapters.visualizers.local_connectivity_view) LocalConnectivityViewerModel (class in tvb.adapters.visualizers.local_connectivity_view) LOCALHOST (tvb.basic.config.settings.WebSettings attribute) locations (tvb.datatypes.sensors.Sensors attribute) LOCKS (tvb.core.entities.file.hdf5_storage_manager.HDF5StorageManager attribute) log_debug() (in module tvb.simulator.common) logged() (in module tvb.interfaces.web.controllers.autologging) logger (tvb.adapters.exporters.export_manager.ExportManager attribute) LOGGER (tvb.adapters.uploaders.brco.parser.XMLParser attribute) logger (tvb.adapters.uploaders.projection_matrix_importer.ProjectionMatrixSurfaceEEGImporter attribute) (tvb.adapters.uploaders.region_mapping_importer.RegionMappingImporter attribute) (tvb.adapters.uploaders.sensors_importer.SensorsImporter attribute) (tvb.adapters.uploaders.zip_surface_importer.ZIPSurfaceImporter attribute) (tvb.contrib.scripts.datatypes.sensors.SensorsInternal attribute) (tvb.contrib.scripts.datatypes.time_series.TimeSeries attribute) (tvb.contrib.scripts.service.head_service.HeadService attribute) LOGGER (tvb.core.adapters.abcuploader.ABCUploader attribute) logger (tvb.core.entities.storage.root_dao.RootDAO attribute) (tvb.core.portlets.xml_reader.XMLPortletReader attribute) LOGGER (tvb.core.services.hpc_operation_service.HPCOperationService attribute) logger (tvb.interfaces.command.demos.importers.new_importer.FooDataImporter attribute) LOGGER (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController attribute) LOGGER_CONFIG_FILE_NAME (tvb.basic.config.profile_settings.BaseSettingsProfile attribute) (tvb.basic.config.profile_settings.LibrarySettingsProfile attribute) (tvb.basic.config.profile_settings.MATLABLibraryProfile attribute) (tvb.basic.config.profile_settings.TestLibraryProfile attribute) (tvb.config.profile_settings.WebSettingsProfile attribute) LoggerBuilder (class in tvb.basic.logger.builder) LOGIN (tvb.interfaces.rest.commons.strings.RestLink attribute) LoginForm (class in tvb.interfaces.web.controllers.users_controller) logistic() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) lognormal() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) logout() (tvb.interfaces.rest.client.tvb_client.TVBClient method) (tvb.interfaces.web.controllers.users_controller.UserController method) logseries() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_c) LookUpTable (class in tvb.contrib.scripts.datatypes.lookup_tables)

M

m (tvb.dsl.NeuroML.lems.model.fundamental.Dimension attribute) (tvb.dsl_cuda.lems.model.fundamental.Dimension attribute) m_i (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) MAGIC_NUMBER (tvb.basic.config.profile_settings.BaseSettingsProfile attribute) main() (in module tvb.interfaces.command.benchmark) MAIN_HELP_PAGE (tvb.interfaces.web.controllers.help.help_config.HelpConfig attribute) MainApi (class in tvb.interfaces.rest.client.main_api) make_cortex() (tvb.contrib.scripts.datatypes.head.Head method) make_float() (in module tvb.contrib.scripts.utils.data_structures_utils) make_id() (in module tvb.dsl.NeuroML.lems.base.util) (in module tvb.dsl_cuda.lems.base.util) make_int() (in module tvb.contrib.scripts.utils.data_structures_utils) make_op_node() (tvb.dsl.NeuroML.lems.parser.expr.ExprParser method) (tvb.dsl_cuda.lems.parser.expr.ExprParser method) make_proj_matrix() (in module tvb.datatypes.projections) make_sensors() (in module tvb.datatypes.sensors) make_surface() (in module tvb.datatypes.surfaces) Map (class in tvb.dsl.NeuroML.lems.base.map) (class in tvb.dsl_cuda.lems.base.map) map_astr() (in module tvb.simulator.common) MappedArrayVisualizer (class in tvb.adapters.visualizers.matrix_viewer) MappedArrayVolumeVisualizer (class in tvb.adapters.visualizers.region_volume_mapping) mapping_file (tvb.adapters.uploaders.region_mapping_importer.RegionMappingImporterModel attribute) mappings_file (tvb.adapters.uploaders.nifti_importer.NIFTIImporterModel attribute) mark_burst_finished() (tvb.core.services.burst_service.BurstService method) mark_complete() (tvb.core.entities.model.model_operation.Operation method) mark_file_for_delete() (tvb.interfaces.web.controllers.base_controller.BaseController static method) mark_invalid() (tvb.core.entities.transient.structure_entities.DataTypeMetaData method) MatchingIndex (class in tvb.adapters.analyzers.bct_degree_adapters) matlab() (tvb.adapters.analyzers.matlab_worker.MatlabWorker method) matlab_paths (tvb.adapters.analyzers.matlab_worker.MatlabWorker attribute) MATLAB_PROFILE (tvb.basic.profile.TvbProfile attribute) MATLABLibraryProfile (class in tvb.basic.config.profile_settings) MatlabValidator (class in tvb.interfaces.web.controllers.settings_controller) MatlabWorker (class in tvb.adapters.analyzers.matlab_worker) matrix (tvb.datatypes.local_connectivity.LocalConnectivity attribute) matrix_gdist (tvb.datatypes.local_connectivity.LocalConnectivity attribute) matrix_non_zero_max (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) matrix_non_zero_mean (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) matrix_non_zero_min (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) MatrixVisualizerForm (class in tvb.adapters.visualizers.matrix_viewer) MatrixVisualizerModel (class in tvb.adapters.visualizers.matrix_viewer) max (tvb.core.neotraits.forms.FloatField attribute) (tvb.core.neotraits.forms.IntField attribute) (tvb.core.neotraits.forms.SimpleFloatField attribute) MAX_ASYNC_CONNECTIONS (tvb.basic.config.settings.DBSettings attribute) MAX_CONNECTIONS (tvb.basic.config.settings.DBSettings attribute) max_freq (tvb.analyzers.node_complex_coherence.NodeComplexCoherence attribute) (tvb.datatypes.spectral.ComplexCoherenceSpectrum attribute) (tvb.datatypes.spectral.FourierSpectrum attribute) max_frequency (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) MAX_INT_VALUE (tvb.contrib.scripts.utils.data_structures_utils.CalculusConfig attribute) MAX_N_VERTICES (tvb.datatypes.tracts.Tracts attribute) MAX_PREVIEW_DATA_LENGTH (tvb.adapters.visualizers.time_series.TimeSeriesDisplay attribute) MAX_RAY (tvb.adapters.visualizers.connectivity.Connectivity2DViewer attribute) MAX_SINGLE_VALUE (tvb.contrib.scripts.utils.data_structures_utils.CalculusConfig attribute) MAX_VALUE (tvb.interfaces.web.controllers.settings_controller.SurfaceVerticesNrValidator attribute) MAX_WEIGHT_VALUE (tvb.adapters.visualizers.connectivity.Connectivity2DViewer attribute) measure (tvb.adapters.visualizers.region_volume_mapping.VolumeVisualizerModel attribute) MEASURE_METRICS_CLASS (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) MEASURE_METRICS_MODULE (tvb.config.init.introspector_registry.IntrospectionRegistry attribute) MeasurePointsSelection (class in tvb.core.entities.model.model_datatype) MEEG (tvb.contrib.scripts.datatypes.time_series.PossibleVariables attribute) MEG (class in tvb.simulator.monitors) meg (tvb.contrib.scripts.datatypes.projections.TvbProjectionType attribute) MEG (tvb.datatypes.projections.ProjectionsType attribute) meg_projection (tvb.contrib.scripts.datatypes.head.Head attribute) meg_sensors (tvb.contrib.scripts.datatypes.head.Head attribute) MEGMonitorForm (class in tvb.adapters.simulator.monitor_forms) MEGsensor_labels (tvb.contrib.scripts.datatypes.time_series.TimeSeriesMEG attribute) MEGViewModel (class in tvb.core.entities.file.simulator.view_model) members (tvb.core.entities.model.model_project.Project attribute) memory_requirement() (tvb.simulator.simulator.Simulator method) merge() (tvb.core.neotraits._h5accessors.DataSetMetaData method) (tvb.datatypes.surfaces.ValidationResult method) merge_component_types() (tvb.dsl.NeuroML.lems.model.model.Model method) (tvb.dsl_cuda.lems.model.model.Model method) merge_data() (tvb.core.entities.transient.structure_entities.DataTypeMetaData method) merge_lists() (in module tvb.dsl.NeuroML.lems.base.util) (in module tvb.dsl_cuda.lems.base.util) merge_maps() (in module tvb.dsl.NeuroML.lems.base.util) (in module tvb.dsl_cuda.lems.base.util) MESSAGE (tvb.core.entities.file.files_update_manager.FilesUpdateManager attribute) message (tvb.dsl.NeuroML.lems.base.errors.LEMSError attribute) (tvb.dsl_cuda.lems.base.errors.LEMSError attribute) message_prefix (tvb.interfaces.rest.commons.exceptions.ServiceException attribute) meta_attributes_list (tvb.core.entities.transient.context_overlay.CommonDetails attribute) MetaClassFactory() (in module tvb.core.entities.storage.session_maker) metadata2tree() (tvb.core.entities.transient.structure_entities.StructureNode static method) MetaType (class in tvb.basic.neotraits._declarative_base)

method_decorators (tvb.interfaces.rest.server.resources.rest_resource.RestResource attribute) (tvb.interfaces.rest.server.resources.rest_resource.SecuredResource attribute) metric_operation_group (tvb.core.entities.model.model_burst.BurstConfiguration attribute) metrics (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.core.entities.file.simulator.datatype_measure_h5.DatatypeMeasure attribute) midpoint (tvb.simulator.coupling.HyperbolicTangent attribute) (tvb.simulator.coupling.Sigmoidal attribute) (tvb.simulator.coupling.SigmoidalJansenRit attribute) min (tvb.core.neotraits.forms.FloatField attribute) (tvb.core.neotraits.forms.IntField attribute) (tvb.core.neotraits.forms.SimpleFloatField attribute) MIN_INT_VALUE (tvb.contrib.scripts.utils.data_structures_utils.CalculusConfig attribute) MIN_RAY (tvb.adapters.visualizers.connectivity.Connectivity2DViewer attribute) MIN_SINGLE_VALUE (tvb.contrib.scripts.utils.data_structures_utils.CalculusConfig attribute) MIN_WEIGHT_VALUE (tvb.adapters.visualizers.connectivity.Connectivity2DViewer attribute) missing_value (tvb.core.neotraits.forms.SelectField attribute) (tvb.core.neotraits.forms.TraitDataTypeSelectField attribute) MissingDataException MissingDataFileException MissingDataSetException mixing_matrix (tvb.datatypes.mode_decompositions.IndependentComponents attribute) MixtureOfGammas (class in tvb.datatypes.equations) MixtureOfGammasEquationForm (class in tvb.adapters.simulator.equation_forms) Model (class in tvb.dsl.NeuroML.lems.model.model) (class in tvb.dsl_cuda.lems.model.model) (class in tvb.simulator.models.base) model (tvb.dsl.NeuroML.lems.parser.LEMS.LEMSFileParser attribute) (tvb.dsl_cuda.lems.parser.LEMS.LEMSFileParser attribute) (tvb.simulator.plot.phase_plane_interactive.PhasePlaneInteractive attribute) (tvb.simulator.simulator.Simulator attribute) model_changed() (tvb.interfaces.web.controllers.burst.dynamic_model_controller.DynamicModelController method) model_class (tvb.core.entities.model.model_burst.Dynamic attribute) MODEL_PARAM_FIELD (tvb.interfaces.web.controllers.spatial.surface_model_parameters_controller.SurfaceModelParametersController attribute) model_parameters (tvb.core.entities.model.model_burst.Dynamic attribute) ModelError, [1] ModelNumbaDfun (class in tvb.simulator.models.base) ModelsEnum (class in tvb.simulator.models) MODES (tvb.contrib.scripts.datatypes.time_series.TimeSeriesDimensions attribute) modification (tvb.simulator.models.epileptor.Epileptor attribute) (tvb.simulator.models.epileptor.Epileptor2D attribute) ModularityOCSM (class in tvb.adapters.analyzers.bct_adapters) ModularityOpCSMU (class in tvb.adapters.analyzers.bct_adapters) module (tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex attribute) (tvb.adapters.datatypes.db.connectivity.ConnectivityIndex attribute) (tvb.adapters.datatypes.db.fcd.FcdIndex attribute) (tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex attribute) (tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex attribute) (tvb.adapters.datatypes.db.graph.CovarianceIndex attribute) (tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex attribute) (tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex attribute) (tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex attribute) (tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex attribute) (tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliRegionIndex attribute) (tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex attribute) (tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex attribute) (tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex attribute) (tvb.adapters.datatypes.db.sensors.SensorsIndex attribute) (tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex attribute) (tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex attribute) (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.adapters.datatypes.db.structural.StructuralMRIIndex attribute) (tvb.adapters.datatypes.db.surface.SurfaceIndex attribute) (tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex attribute) (tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex attribute) (tvb.adapters.datatypes.db.tracts.TractsIndex attribute) (tvb.adapters.datatypes.db.volume.VolumeIndex attribute) (tvb.core.entities.model.model_datatype.DataType attribute) (tvb.core.entities.model.model_datatype.DataTypeGroup attribute) (tvb.core.entities.model.model_datatype.DataTypeMatrix attribute) (tvb.core.entities.model.model_operation.Algorithm attribute) Monitor (class in tvb.simulator.monitors) monitor_names (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_1 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_10 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_11 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_12 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_13 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_14 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_15 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_2 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_3 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_4 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_5 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_6 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_7 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_8 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) monitor_stock_9 (tvb.core.entities.file.simulator.simulation_history_h5.SimulationHistory attribute) MonitorForm (class in tvb.adapters.simulator.monitor_forms) monitors (tvb.core.entities.file.simulator.view_model.SimulatorAdapterModel attribute) (tvb.simulator.simulator.Simulator attribute) MonitorViewModel (class in tvb.core.entities.file.simulator.view_model) monopolar_to_bipolar() (in module tvb.contrib.scripts.utils.data_structures_utils) MONTBRIO_PAZO_ROXIN (tvb.simulator.models.ModelsEnum attribute) MorrisLecar (class in tvb.contrib.simulator.models.morris_lecar) mother (tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex attribute) (tvb.analyzers.wavelet.ContinuousWaveletTransform attribute) (tvb.datatypes.spectral.WaveletCoefficients attribute) motif_all_to_all() (tvb.datatypes.connectivity.Connectivity method) motif_chain_directed() (tvb.datatypes.connectivity.Connectivity method) motif_chain_undirected() (tvb.datatypes.connectivity.Connectivity method) motif_linear_directed() (tvb.datatypes.connectivity.Connectivity method) motif_linear_undirected() (tvb.datatypes.connectivity.Connectivity method) mouse_brain_visualizer() (in module tvb.adapters.creators.allen_creator) move_datatype() (tvb.core.entities.file.files_helper.FilesHelper method) move_overwrite_files_to_folder_with_wildcard() (in module tvb.contrib.scripts.utils.file_utils) MriVolumeVisualizer (class in tvb.adapters.visualizers.region_volume_mapping) MriVolumeVisualizerForm (class in tvb.adapters.visualizers.region_volume_mapping) MSG_MISSING_CONNECTIVITY (tvb.interfaces.web.controllers.spatial.region_stimulus_controller.RegionStimulusController attribute) MSG_MISSING_SURFACE (tvb.interfaces.web.controllers.spatial.base_spatio_temporal_controller.SpatioTemporalController attribute) mu (tvb.simulator.models.jansen_rit.JansenRit attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetFitzHughNagumo attribute) (tvb.simulator.models.stefanescu_jirsa.ReducedSetHindmarshRose attribute) mu_o (tvb.contrib.simulator.models.wong_wang.WongWang attribute) multi_instantiates (tvb.dsl.NeuroML.lems.model.structure.Structure attribute) (tvb.dsl_cuda.lems.model.structure.Structure attribute) MultiInstantiate (class in tvb.dsl.NeuroML.lems.model.structure) (class in tvb.dsl_cuda.lems.model.structure) multinomial() (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_b) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_c) (in module tvb.contrib.from_articles.region_deterministic_bnm_g2d_d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj2d) (in module tvb.contrib.from_articles.region_deterministic_bnm_sj3d_a) (in module tvb.contrib.from_articles.region_deterministic_bnm_wc_a)